Protein–RNA interactions for Protein: Q61467

Zic4, Zinc finger protein ZIC 4, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zic4Q61467 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Zic4Q61467 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Zic4Q61467 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Zic4Q61467 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Zic4Q61467 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Zic4Q61467 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Zic4Q61467 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Zic4Q61467 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Zic4Q61467 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Zic4Q61467 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Zic4Q61467 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Zic4Q61467 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Zic4Q61467 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Zic4Q61467 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Zic4Q61467 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Zic4Q61467 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Zic4Q61467 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Zic4Q61467 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.55■□□□□ 0.4
Zic4Q61467 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Zic4Q61467 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Zic4Q61467 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Zic4Q61467 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Zic4Q61467 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Zic4Q61467 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Zic4Q61467 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC17.53■□□□□ 0.4
Zic4Q61467 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Zic4Q61467 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Zic4Q61467 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.53■□□□□ 0.4
Zic4Q61467 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.53■□□□□ 0.4
Zic4Q61467 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Zic4Q61467 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Zic4Q61467 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Zic4Q61467 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Zic4Q61467 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Zic4Q61467 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Zic4Q61467 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Zic4Q61467 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Zic4Q61467 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Zic4Q61467 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.52■□□□□ 0.4
Zic4Q61467 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Zic4Q61467 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Zic4Q61467 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Zic4Q61467 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.51■□□□□ 0.39
Zic4Q61467 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Zic4Q61467 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Zic4Q61467 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Zic4Q61467 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Zic4Q61467 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Zic4Q61467 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Zic4Q61467 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Zic4Q61467 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Zic4Q61467 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Zic4Q61467 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zic4Q61467 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zic4Q61467 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zic4Q61467 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Zic4Q61467 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Zic4Q61467 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Zic4Q61467 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Zic4Q61467 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Zic4Q61467 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.49■□□□□ 0.39
Zic4Q61467 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Zic4Q61467 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.49■□□□□ 0.39
Zic4Q61467 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zic4Q61467 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Zic4Q61467 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zic4Q61467 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zic4Q61467 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC17.48■□□□□ 0.39
Zic4Q61467 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.48■□□□□ 0.39
Zic4Q61467 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zic4Q61467 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zic4Q61467 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.48■□□□□ 0.39
Zic4Q61467 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zic4Q61467 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Zic4Q61467 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Zic4Q61467 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Zic4Q61467 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Zic4Q61467 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Zic4Q61467 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Zic4Q61467 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.47■□□□□ 0.39
Zic4Q61467 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Zic4Q61467 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Zic4Q61467 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC17.46■□□□□ 0.39
Zic4Q61467 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.46■□□□□ 0.39
Zic4Q61467 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Zic4Q61467 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.46■□□□□ 0.39
Zic4Q61467 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Zic4Q61467 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Zic4Q61467 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zic4Q61467 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zic4Q61467 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Zic4Q61467 Gm9812-201ENSMUST00000061934 968 ntBASIC17.45■□□□□ 0.38
Zic4Q61467 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Zic4Q61467 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zic4Q61467 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zic4Q61467 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zic4Q61467 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Zic4Q61467 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zic4Q61467 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Zic4Q61467 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms