Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ift88Q61371 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC23.9■■□□□ 1.42
Ift88Q61371 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ift88Q61371 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.9■■□□□ 1.42
Ift88Q61371 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ift88Q61371 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Ift88Q61371 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC23.89■■□□□ 1.42
Ift88Q61371 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ift88Q61371 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Ift88Q61371 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Ift88Q61371 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Ift88Q61371 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ift88Q61371 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ift88Q61371 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ift88Q61371 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Ift88Q61371 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ift88Q61371 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Ift88Q61371 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Ift88Q61371 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ift88Q61371 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.87■■□□□ 1.41
Ift88Q61371 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ift88Q61371 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ift88Q61371 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ift88Q61371 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Ift88Q61371 Gm44428-201ENSMUST00000204474 874 ntBASIC23.86■■□□□ 1.41
Ift88Q61371 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ift88Q61371 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ift88Q61371 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ift88Q61371 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Ift88Q61371 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ift88Q61371 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ift88Q61371 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Ift88Q61371 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ift88Q61371 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Ift88Q61371 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Ift88Q61371 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ift88Q61371 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC23.84■■□□□ 1.41
Ift88Q61371 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ift88Q61371 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC23.84■■□□□ 1.41
Ift88Q61371 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ift88Q61371 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Ift88Q61371 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.83■■□□□ 1.41
Ift88Q61371 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.83■■□□□ 1.41
Ift88Q61371 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.83■■□□□ 1.41
Ift88Q61371 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Ift88Q61371 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ift88Q61371 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ift88Q61371 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.4
Ift88Q61371 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ift88Q61371 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC23.82■■□□□ 1.4
Ift88Q61371 Gm6311-201ENSMUST00000073790 878 ntBASIC23.81■■□□□ 1.4
Ift88Q61371 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Ift88Q61371 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ift88Q61371 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ift88Q61371 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Ift88Q61371 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC23.81■■□□□ 1.4
Ift88Q61371 Gm37415-201ENSMUST00000192265 2054 ntBASIC23.8■■□□□ 1.4
Ift88Q61371 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.8■■□□□ 1.4
Ift88Q61371 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ift88Q61371 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Ift88Q61371 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ift88Q61371 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC23.79■■□□□ 1.4
Ift88Q61371 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC23.79■■□□□ 1.4
Ift88Q61371 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ift88Q61371 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Ift88Q61371 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC23.79■■□□□ 1.4
Ift88Q61371 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ift88Q61371 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ift88Q61371 Gm38160-201ENSMUST00000193090 2499 ntBASIC23.78■■□□□ 1.4
Ift88Q61371 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ift88Q61371 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ift88Q61371 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Ift88Q61371 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.78■■□□□ 1.4
Ift88Q61371 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC23.78■■□□□ 1.4
Ift88Q61371 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ift88Q61371 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Ift88Q61371 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.77■■□□□ 1.4
Ift88Q61371 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC23.77■■□□□ 1.4
Ift88Q61371 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Ift88Q61371 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Ift88Q61371 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Ift88Q61371 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ift88Q61371 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ift88Q61371 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
Ift88Q61371 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Ift88Q61371 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ift88Q61371 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Ift88Q61371 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ift88Q61371 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Ift88Q61371 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
Ift88Q61371 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ift88Q61371 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ift88Q61371 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC23.75■■□□□ 1.39
Ift88Q61371 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC23.74■■□□□ 1.39
Ift88Q61371 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC23.74■■□□□ 1.39
Ift88Q61371 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ift88Q61371 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC23.74■■□□□ 1.39
Ift88Q61371 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ift88Q61371 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
Ift88Q61371 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms