Protein–RNA interactions for Protein: Q61045

Sim1, Single-minded homolog 1, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim1Q61045 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Sim1Q61045 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.43■■□□□ 1.02
Sim1Q61045 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sim1Q61045 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.43■■□□□ 1.02
Sim1Q61045 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sim1Q61045 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Sim1Q61045 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Sim1Q61045 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Sim1Q61045 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Sim1Q61045 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sim1Q61045 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.42■■□□□ 1.02
Sim1Q61045 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Sim1Q61045 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Sim1Q61045 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Sim1Q61045 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sim1Q61045 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Sim1Q61045 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sim1Q61045 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sim1Q61045 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.39■■□□□ 1.01
Sim1Q61045 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Sim1Q61045 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.39■■□□□ 1.01
Sim1Q61045 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Sim1Q61045 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Sim1Q61045 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sim1Q61045 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sim1Q61045 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.38■■□□□ 1.01
Sim1Q61045 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Sim1Q61045 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sim1Q61045 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sim1Q61045 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Sim1Q61045 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sim1Q61045 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Sim1Q61045 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Sim1Q61045 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sim1Q61045 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sim1Q61045 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sim1Q61045 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.36■■□□□ 1.01
Sim1Q61045 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sim1Q61045 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sim1Q61045 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Sim1Q61045 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.35■■□□□ 1.01
Sim1Q61045 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sim1Q61045 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sim1Q61045 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sim1Q61045 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sim1Q61045 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Sim1Q61045 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sim1Q61045 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sim1Q61045 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Sim1Q61045 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sim1Q61045 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
Sim1Q61045 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sim1Q61045 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sim1Q61045 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sim1Q61045 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sim1Q61045 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.33■■□□□ 1.01
Sim1Q61045 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.33■■□□□ 1.01
Sim1Q61045 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Sim1Q61045 Gm13241-201ENSMUST00000094493 780 ntBASIC21.33■■□□□ 1.01
Sim1Q61045 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Sim1Q61045 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.33■■□□□ 1
Sim1Q61045 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sim1Q61045 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sim1Q61045 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
Sim1Q61045 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.32■■□□□ 1
Sim1Q61045 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sim1Q61045 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sim1Q61045 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sim1Q61045 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Sim1Q61045 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.31■■□□□ 1
Sim1Q61045 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sim1Q61045 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.31■■□□□ 1
Sim1Q61045 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.31■■□□□ 1
Sim1Q61045 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Sim1Q61045 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.31■■□□□ 1
Sim1Q61045 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Sim1Q61045 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.31■■□□□ 1
Sim1Q61045 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sim1Q61045 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Sim1Q61045 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.3■■□□□ 1
Sim1Q61045 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Sim1Q61045 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.29■■□□□ 1
Sim1Q61045 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.29■■□□□ 1
Sim1Q61045 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sim1Q61045 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.29■■□□□ 1
Sim1Q61045 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.29■■□□□ 1
Sim1Q61045 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.29■■□□□ 1
Sim1Q61045 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Sim1Q61045 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sim1Q61045 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.28■■□□□ 1
Sim1Q61045 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Sim1Q61045 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sim1Q61045 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sim1Q61045 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sim1Q61045 Gm7417-201ENSMUST00000192950 473 ntBASIC21.27■■□□□ 1
Sim1Q61045 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sim1Q61045 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.27■■□□□ 1
Sim1Q61045 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Sim1Q61045 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Sim1Q61045 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms