Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Scn2bQ56A07 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Scn2bQ56A07 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Scn2bQ56A07 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Scn2bQ56A07 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Scn2bQ56A07 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Scn2bQ56A07 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scn2bQ56A07 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.34■■□□□ 1.01
Scn2bQ56A07 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scn2bQ56A07 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scn2bQ56A07 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scn2bQ56A07 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scn2bQ56A07 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Scn2bQ56A07 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scn2bQ56A07 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Scn2bQ56A07 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Scn2bQ56A07 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Scn2bQ56A07 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.33■■□□□ 1.01
Scn2bQ56A07 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.33■■□□□ 1
Scn2bQ56A07 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.32■■□□□ 1
Scn2bQ56A07 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Scn2bQ56A07 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.32■■□□□ 1
Scn2bQ56A07 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Scn2bQ56A07 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Scn2bQ56A07 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.31■■□□□ 1
Scn2bQ56A07 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.31■■□□□ 1
Scn2bQ56A07 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
Scn2bQ56A07 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.31■■□□□ 1
Scn2bQ56A07 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Scn2bQ56A07 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Scn2bQ56A07 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Scn2bQ56A07 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Scn2bQ56A07 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.3■■□□□ 1
Scn2bQ56A07 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Scn2bQ56A07 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.3■■□□□ 1
Scn2bQ56A07 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Scn2bQ56A07 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Scn2bQ56A07 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Scn2bQ56A07 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Scn2bQ56A07 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.29■■□□□ 1
Scn2bQ56A07 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Scn2bQ56A07 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Scn2bQ56A07 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Scn2bQ56A07 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Scn2bQ56A07 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Scn2bQ56A07 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.28■■□□□ 1
Scn2bQ56A07 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Scn2bQ56A07 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Scn2bQ56A07 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
Scn2bQ56A07 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Scn2bQ56A07 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Scn2bQ56A07 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Scn2bQ56A07 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Scn2bQ56A07 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Scn2bQ56A07 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.27■■□□□ 1
Scn2bQ56A07 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Scn2bQ56A07 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Scn2bQ56A07 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Scn2bQ56A07 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Scn2bQ56A07 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.26■□□□□ 0.99
Scn2bQ56A07 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scn2bQ56A07 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scn2bQ56A07 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scn2bQ56A07 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scn2bQ56A07 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scn2bQ56A07 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.24■□□□□ 0.99
Scn2bQ56A07 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scn2bQ56A07 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scn2bQ56A07 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scn2bQ56A07 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.24■□□□□ 0.99
Scn2bQ56A07 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Scn2bQ56A07 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.24■□□□□ 0.99
Scn2bQ56A07 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Scn2bQ56A07 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.23■□□□□ 0.99
Scn2bQ56A07 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Scn2bQ56A07 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.23■□□□□ 0.99
Scn2bQ56A07 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scn2bQ56A07 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.23■□□□□ 0.99
Scn2bQ56A07 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.23■□□□□ 0.99
Scn2bQ56A07 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Scn2bQ56A07 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scn2bQ56A07 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.22■□□□□ 0.99
Scn2bQ56A07 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.22■□□□□ 0.99
Scn2bQ56A07 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scn2bQ56A07 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Scn2bQ56A07 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scn2bQ56A07 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scn2bQ56A07 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scn2bQ56A07 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scn2bQ56A07 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Scn2bQ56A07 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.2■□□□□ 0.98
Scn2bQ56A07 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.2■□□□□ 0.98
Scn2bQ56A07 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.2■□□□□ 0.98
Scn2bQ56A07 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
Scn2bQ56A07 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Scn2bQ56A07 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Scn2bQ56A07 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.19■□□□□ 0.98
Scn2bQ56A07 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.19■□□□□ 0.98
Scn2bQ56A07 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scn2bQ56A07 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms