Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Smcr8Q3UMB5 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Smcr8Q3UMB5 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Smcr8Q3UMB5 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC23.21■■□□□ 1.31
Smcr8Q3UMB5 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Smcr8Q3UMB5 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Smcr8Q3UMB5 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Smcr8Q3UMB5 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Smcr8Q3UMB5 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Smcr8Q3UMB5 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Smcr8Q3UMB5 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Smcr8Q3UMB5 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Smcr8Q3UMB5 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Smcr8Q3UMB5 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Smcr8Q3UMB5 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Smcr8Q3UMB5 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
Smcr8Q3UMB5 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Smcr8Q3UMB5 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Smcr8Q3UMB5 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Smcr8Q3UMB5 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC23.18■■□□□ 1.3
Smcr8Q3UMB5 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Smcr8Q3UMB5 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
Smcr8Q3UMB5 H3f3aos-201ENSMUST00000097448 2905 ntBASIC23.18■■□□□ 1.3
Smcr8Q3UMB5 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Smcr8Q3UMB5 Gm20634-201ENSMUST00000090779 2956 ntBASIC23.17■■□□□ 1.3
Smcr8Q3UMB5 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC23.17■■□□□ 1.3
Smcr8Q3UMB5 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Smcr8Q3UMB5 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Smcr8Q3UMB5 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Smcr8Q3UMB5 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Smcr8Q3UMB5 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Smcr8Q3UMB5 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Smcr8Q3UMB5 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Smcr8Q3UMB5 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Smcr8Q3UMB5 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Smcr8Q3UMB5 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Smcr8Q3UMB5 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Smcr8Q3UMB5 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Smcr8Q3UMB5 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Smcr8Q3UMB5 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Smcr8Q3UMB5 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC23.14■■□□□ 1.3
Smcr8Q3UMB5 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC23.14■■□□□ 1.29
Smcr8Q3UMB5 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Smcr8Q3UMB5 AC117245.4-201ENSMUST00000217388 1646 ntBASIC23.14■■□□□ 1.29
Smcr8Q3UMB5 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Smcr8Q3UMB5 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Smcr8Q3UMB5 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC23.13■■□□□ 1.29
Smcr8Q3UMB5 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Smcr8Q3UMB5 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC23.13■■□□□ 1.29
Smcr8Q3UMB5 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC23.13■■□□□ 1.29
Smcr8Q3UMB5 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Smcr8Q3UMB5 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Smcr8Q3UMB5 Gm16464-201ENSMUST00000117815 1095 ntBASIC23.12■■□□□ 1.29
Smcr8Q3UMB5 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
Smcr8Q3UMB5 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Smcr8Q3UMB5 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC23.12■■□□□ 1.29
Smcr8Q3UMB5 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Smcr8Q3UMB5 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Smcr8Q3UMB5 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Smcr8Q3UMB5 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Smcr8Q3UMB5 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Smcr8Q3UMB5 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Smcr8Q3UMB5 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Smcr8Q3UMB5 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Smcr8Q3UMB5 Etf1-202ENSMUST00000180351 108 ntBASIC23.11■■□□□ 1.29
Smcr8Q3UMB5 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
Smcr8Q3UMB5 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Smcr8Q3UMB5 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Smcr8Q3UMB5 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC23.11■■□□□ 1.29
Smcr8Q3UMB5 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Smcr8Q3UMB5 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Smcr8Q3UMB5 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC23.1■■□□□ 1.29
Smcr8Q3UMB5 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Smcr8Q3UMB5 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Smcr8Q3UMB5 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Smcr8Q3UMB5 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Smcr8Q3UMB5 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Smcr8Q3UMB5 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Smcr8Q3UMB5 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Smcr8Q3UMB5 Gm28536-201ENSMUST00000190971 1317 ntBASIC23.08■■□□□ 1.29
Smcr8Q3UMB5 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Smcr8Q3UMB5 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Smcr8Q3UMB5 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Smcr8Q3UMB5 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC23.08■■□□□ 1.29
Smcr8Q3UMB5 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Smcr8Q3UMB5 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Smcr8Q3UMB5 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Smcr8Q3UMB5 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Smcr8Q3UMB5 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Smcr8Q3UMB5 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Smcr8Q3UMB5 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Smcr8Q3UMB5 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC23.07■■□□□ 1.28
Smcr8Q3UMB5 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Smcr8Q3UMB5 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
Smcr8Q3UMB5 Gm28731-201ENSMUST00000185564 1569 ntBASIC23.06■■□□□ 1.28
Smcr8Q3UMB5 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Smcr8Q3UMB5 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC23.06■■□□□ 1.28
Smcr8Q3UMB5 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
Smcr8Q3UMB5 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Smcr8Q3UMB5 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC23.06■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms