Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.35■□□□□ 0.85
Tnrc6aQ3UHK8 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tnrc6aQ3UHK8 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.35■□□□□ 0.85
Tnrc6aQ3UHK8 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.35■□□□□ 0.85
Tnrc6aQ3UHK8 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tnrc6aQ3UHK8 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Tnrc6aQ3UHK8 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tnrc6aQ3UHK8 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.34■□□□□ 0.85
Tnrc6aQ3UHK8 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tnrc6aQ3UHK8 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.33■□□□□ 0.85
Tnrc6aQ3UHK8 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.33■□□□□ 0.85
Tnrc6aQ3UHK8 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Tnrc6aQ3UHK8 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tnrc6aQ3UHK8 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tnrc6aQ3UHK8 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tnrc6aQ3UHK8 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tnrc6aQ3UHK8 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tnrc6aQ3UHK8 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tnrc6aQ3UHK8 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tnrc6aQ3UHK8 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tnrc6aQ3UHK8 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tnrc6aQ3UHK8 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tnrc6aQ3UHK8 Etf1-202ENSMUST00000180351 108 ntBASIC20.3■□□□□ 0.84
Tnrc6aQ3UHK8 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.3■□□□□ 0.84
Tnrc6aQ3UHK8 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.3■□□□□ 0.84
Tnrc6aQ3UHK8 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnrc6aQ3UHK8 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.3■□□□□ 0.84
Tnrc6aQ3UHK8 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnrc6aQ3UHK8 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnrc6aQ3UHK8 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnrc6aQ3UHK8 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tnrc6aQ3UHK8 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnrc6aQ3UHK8 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.29■□□□□ 0.84
Tnrc6aQ3UHK8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnrc6aQ3UHK8 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tnrc6aQ3UHK8 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tnrc6aQ3UHK8 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tnrc6aQ3UHK8 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Tnrc6aQ3UHK8 Gm21956-201ENSMUST00000179946 522 ntBASIC20.28■□□□□ 0.84
Tnrc6aQ3UHK8 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Tnrc6aQ3UHK8 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.27■□□□□ 0.84
Tnrc6aQ3UHK8 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Tnrc6aQ3UHK8 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tnrc6aQ3UHK8 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tnrc6aQ3UHK8 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tnrc6aQ3UHK8 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnrc6aQ3UHK8 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Tnrc6aQ3UHK8 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tnrc6aQ3UHK8 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.26■□□□□ 0.83
Tnrc6aQ3UHK8 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tnrc6aQ3UHK8 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tnrc6aQ3UHK8 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tnrc6aQ3UHK8 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tnrc6aQ3UHK8 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tnrc6aQ3UHK8 Gm22238-201ENSMUST00000175222 88 ntBASIC20.25■□□□□ 0.83
Tnrc6aQ3UHK8 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.25■□□□□ 0.83
Tnrc6aQ3UHK8 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tnrc6aQ3UHK8 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tnrc6aQ3UHK8 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tnrc6aQ3UHK8 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnrc6aQ3UHK8 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnrc6aQ3UHK8 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnrc6aQ3UHK8 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnrc6aQ3UHK8 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnrc6aQ3UHK8 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tnrc6aQ3UHK8 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.23■□□□□ 0.83
Tnrc6aQ3UHK8 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnrc6aQ3UHK8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnrc6aQ3UHK8 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tnrc6aQ3UHK8 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tnrc6aQ3UHK8 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tnrc6aQ3UHK8 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.22■□□□□ 0.83
Tnrc6aQ3UHK8 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Tnrc6aQ3UHK8 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tnrc6aQ3UHK8 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tnrc6aQ3UHK8 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tnrc6aQ3UHK8 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tnrc6aQ3UHK8 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tnrc6aQ3UHK8 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnrc6aQ3UHK8 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnrc6aQ3UHK8 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.21■□□□□ 0.83
Tnrc6aQ3UHK8 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Tnrc6aQ3UHK8 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnrc6aQ3UHK8 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnrc6aQ3UHK8 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnrc6aQ3UHK8 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnrc6aQ3UHK8 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.21■□□□□ 0.83
Tnrc6aQ3UHK8 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnrc6aQ3UHK8 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.2■□□□□ 0.82
Tnrc6aQ3UHK8 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tnrc6aQ3UHK8 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnrc6aQ3UHK8 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnrc6aQ3UHK8 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnrc6aQ3UHK8 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnrc6aQ3UHK8 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tnrc6aQ3UHK8 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnrc6aQ3UHK8 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnrc6aQ3UHK8 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.19■□□□□ 0.82
Tnrc6aQ3UHK8 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Tnrc6aQ3UHK8 Gm7417-201ENSMUST00000192950 473 ntBASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms