Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf44Q3UHJ8 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf44Q3UHJ8 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf44Q3UHJ8 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf44Q3UHJ8 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf44Q3UHJ8 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf44Q3UHJ8 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Rnf44Q3UHJ8 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf44Q3UHJ8 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf44Q3UHJ8 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf44Q3UHJ8 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf44Q3UHJ8 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Rnf44Q3UHJ8 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf44Q3UHJ8 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.85■□□□□ 0.93
Rnf44Q3UHJ8 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.85■□□□□ 0.93
Rnf44Q3UHJ8 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf44Q3UHJ8 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Rnf44Q3UHJ8 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf44Q3UHJ8 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf44Q3UHJ8 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf44Q3UHJ8 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf44Q3UHJ8 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf44Q3UHJ8 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf44Q3UHJ8 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.83■□□□□ 0.93
Rnf44Q3UHJ8 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf44Q3UHJ8 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.83■□□□□ 0.93
Rnf44Q3UHJ8 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf44Q3UHJ8 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf44Q3UHJ8 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.82■□□□□ 0.92
Rnf44Q3UHJ8 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf44Q3UHJ8 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Rnf44Q3UHJ8 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf44Q3UHJ8 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf44Q3UHJ8 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf44Q3UHJ8 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf44Q3UHJ8 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Rnf44Q3UHJ8 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf44Q3UHJ8 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf44Q3UHJ8 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Rnf44Q3UHJ8 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf44Q3UHJ8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.81■□□□□ 0.92
Rnf44Q3UHJ8 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.81■□□□□ 0.92
Rnf44Q3UHJ8 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.81■□□□□ 0.92
Rnf44Q3UHJ8 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Rnf44Q3UHJ8 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf44Q3UHJ8 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Rnf44Q3UHJ8 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf44Q3UHJ8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf44Q3UHJ8 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.8■□□□□ 0.92
Rnf44Q3UHJ8 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf44Q3UHJ8 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf44Q3UHJ8 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.8■□□□□ 0.92
Rnf44Q3UHJ8 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf44Q3UHJ8 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.8■□□□□ 0.92
Rnf44Q3UHJ8 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf44Q3UHJ8 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf44Q3UHJ8 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Rnf44Q3UHJ8 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf44Q3UHJ8 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.79■□□□□ 0.92
Rnf44Q3UHJ8 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.79■□□□□ 0.92
Rnf44Q3UHJ8 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf44Q3UHJ8 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf44Q3UHJ8 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf44Q3UHJ8 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf44Q3UHJ8 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.78■□□□□ 0.92
Rnf44Q3UHJ8 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Rnf44Q3UHJ8 Gm45444-201ENSMUST00000211394 898 ntBASIC20.78■□□□□ 0.92
Rnf44Q3UHJ8 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Rnf44Q3UHJ8 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf44Q3UHJ8 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
Rnf44Q3UHJ8 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf44Q3UHJ8 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf44Q3UHJ8 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rnf44Q3UHJ8 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rnf44Q3UHJ8 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.77■□□□□ 0.92
Rnf44Q3UHJ8 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rnf44Q3UHJ8 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf44Q3UHJ8 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf44Q3UHJ8 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf44Q3UHJ8 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf44Q3UHJ8 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf44Q3UHJ8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf44Q3UHJ8 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf44Q3UHJ8 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf44Q3UHJ8 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Rnf44Q3UHJ8 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
Rnf44Q3UHJ8 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf44Q3UHJ8 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.75■□□□□ 0.91
Rnf44Q3UHJ8 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Rnf44Q3UHJ8 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Rnf44Q3UHJ8 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Rnf44Q3UHJ8 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf44Q3UHJ8 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf44Q3UHJ8 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf44Q3UHJ8 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Rnf44Q3UHJ8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Rnf44Q3UHJ8 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf44Q3UHJ8 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf44Q3UHJ8 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf44Q3UHJ8 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms