Protein–RNA interactions for Protein: Q3U3V8

Xrra1, X-ray radiation resistance-associated protein 1, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrra1Q3U3V8 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Xrra1Q3U3V8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.61■□□□□ 0.89
Xrra1Q3U3V8 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Xrra1Q3U3V8 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Xrra1Q3U3V8 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Xrra1Q3U3V8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Xrra1Q3U3V8 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Xrra1Q3U3V8 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Xrra1Q3U3V8 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.59■□□□□ 0.89
Xrra1Q3U3V8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Xrra1Q3U3V8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.59■□□□□ 0.89
Xrra1Q3U3V8 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Xrra1Q3U3V8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.59■□□□□ 0.89
Xrra1Q3U3V8 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Xrra1Q3U3V8 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Xrra1Q3U3V8 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Xrra1Q3U3V8 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Xrra1Q3U3V8 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Xrra1Q3U3V8 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.57■□□□□ 0.88
Xrra1Q3U3V8 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Xrra1Q3U3V8 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.56■□□□□ 0.88
Xrra1Q3U3V8 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Xrra1Q3U3V8 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
Xrra1Q3U3V8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Xrra1Q3U3V8 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Xrra1Q3U3V8 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.56■□□□□ 0.88
Xrra1Q3U3V8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Xrra1Q3U3V8 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.56■□□□□ 0.88
Xrra1Q3U3V8 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.56■□□□□ 0.88
Xrra1Q3U3V8 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Xrra1Q3U3V8 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Xrra1Q3U3V8 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Xrra1Q3U3V8 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Xrra1Q3U3V8 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Xrra1Q3U3V8 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Xrra1Q3U3V8 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Xrra1Q3U3V8 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Xrra1Q3U3V8 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Xrra1Q3U3V8 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Xrra1Q3U3V8 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Xrra1Q3U3V8 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Xrra1Q3U3V8 Notumos-201ENSMUST00000151998 2659 ntBASIC20.55■□□□□ 0.88
Xrra1Q3U3V8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Xrra1Q3U3V8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Xrra1Q3U3V8 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Xrra1Q3U3V8 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Xrra1Q3U3V8 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Xrra1Q3U3V8 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.54■□□□□ 0.88
Xrra1Q3U3V8 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
Xrra1Q3U3V8 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Xrra1Q3U3V8 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.53■□□□□ 0.88
Xrra1Q3U3V8 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Xrra1Q3U3V8 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Xrra1Q3U3V8 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Xrra1Q3U3V8 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Xrra1Q3U3V8 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Xrra1Q3U3V8 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Xrra1Q3U3V8 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Xrra1Q3U3V8 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Xrra1Q3U3V8 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Xrra1Q3U3V8 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Xrra1Q3U3V8 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Xrra1Q3U3V8 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Xrra1Q3U3V8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Xrra1Q3U3V8 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Xrra1Q3U3V8 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Xrra1Q3U3V8 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Xrra1Q3U3V8 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Xrra1Q3U3V8 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Xrra1Q3U3V8 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Xrra1Q3U3V8 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Xrra1Q3U3V8 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Xrra1Q3U3V8 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Xrra1Q3U3V8 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Xrra1Q3U3V8 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.49■□□□□ 0.87
Xrra1Q3U3V8 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Xrra1Q3U3V8 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.49■□□□□ 0.87
Xrra1Q3U3V8 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Xrra1Q3U3V8 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Xrra1Q3U3V8 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Xrra1Q3U3V8 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Xrra1Q3U3V8 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Xrra1Q3U3V8 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.48■□□□□ 0.87
Xrra1Q3U3V8 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.48■□□□□ 0.87
Xrra1Q3U3V8 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Xrra1Q3U3V8 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Xrra1Q3U3V8 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.47■□□□□ 0.87
Xrra1Q3U3V8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Xrra1Q3U3V8 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Xrra1Q3U3V8 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Xrra1Q3U3V8 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Xrra1Q3U3V8 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Xrra1Q3U3V8 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Xrra1Q3U3V8 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Xrra1Q3U3V8 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Xrra1Q3U3V8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Xrra1Q3U3V8 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Xrra1Q3U3V8 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Xrra1Q3U3V8 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Xrra1Q3U3V8 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms