Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.27■□□□□ 0.52
Fndc4Q3TR08 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Fndc4Q3TR08 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Fndc4Q3TR08 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Fndc4Q3TR08 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Fndc4Q3TR08 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Fndc4Q3TR08 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Fndc4Q3TR08 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Fndc4Q3TR08 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Fndc4Q3TR08 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Fndc4Q3TR08 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.25■□□□□ 0.51
Fndc4Q3TR08 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Fndc4Q3TR08 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Fndc4Q3TR08 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Fndc4Q3TR08 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Fndc4Q3TR08 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.25■□□□□ 0.51
Fndc4Q3TR08 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Fndc4Q3TR08 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Fndc4Q3TR08 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Fndc4Q3TR08 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Fndc4Q3TR08 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.24■□□□□ 0.51
Fndc4Q3TR08 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.24■□□□□ 0.51
Fndc4Q3TR08 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Fndc4Q3TR08 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Fndc4Q3TR08 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Fndc4Q3TR08 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Fndc4Q3TR08 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Fndc4Q3TR08 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Fndc4Q3TR08 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Fndc4Q3TR08 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.23■□□□□ 0.51
Fndc4Q3TR08 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Fndc4Q3TR08 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Fndc4Q3TR08 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.23■□□□□ 0.51
Fndc4Q3TR08 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Fndc4Q3TR08 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Fndc4Q3TR08 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fndc4Q3TR08 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fndc4Q3TR08 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fndc4Q3TR08 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fndc4Q3TR08 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Fndc4Q3TR08 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Fndc4Q3TR08 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Fndc4Q3TR08 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fndc4Q3TR08 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fndc4Q3TR08 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fndc4Q3TR08 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fndc4Q3TR08 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Fndc4Q3TR08 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Fndc4Q3TR08 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Fndc4Q3TR08 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Fndc4Q3TR08 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Fndc4Q3TR08 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Fndc4Q3TR08 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Fndc4Q3TR08 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Fndc4Q3TR08 Terc-201ENSMUST00000082862 423 ntBASIC18.21■□□□□ 0.51
Fndc4Q3TR08 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Fndc4Q3TR08 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Fndc4Q3TR08 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Fndc4Q3TR08 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Fndc4Q3TR08 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Fndc4Q3TR08 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Fndc4Q3TR08 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fndc4Q3TR08 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fndc4Q3TR08 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fndc4Q3TR08 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Fndc4Q3TR08 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.2■□□□□ 0.5
Fndc4Q3TR08 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.2■□□□□ 0.5
Fndc4Q3TR08 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fndc4Q3TR08 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fndc4Q3TR08 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Fndc4Q3TR08 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Fndc4Q3TR08 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fndc4Q3TR08 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fndc4Q3TR08 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Fndc4Q3TR08 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.19■□□□□ 0.5
Fndc4Q3TR08 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Fndc4Q3TR08 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fndc4Q3TR08 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.19■□□□□ 0.5
Fndc4Q3TR08 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fndc4Q3TR08 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fndc4Q3TR08 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Fndc4Q3TR08 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fndc4Q3TR08 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fndc4Q3TR08 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fndc4Q3TR08 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Fndc4Q3TR08 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fndc4Q3TR08 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fndc4Q3TR08 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Fndc4Q3TR08 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Fndc4Q3TR08 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Fndc4Q3TR08 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Fndc4Q3TR08 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fndc4Q3TR08 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fndc4Q3TR08 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.16■□□□□ 0.5
Fndc4Q3TR08 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.16■□□□□ 0.5
Fndc4Q3TR08 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Fndc4Q3TR08 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Fndc4Q3TR08 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Fndc4Q3TR08 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Fndc4Q3TR08 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms