Protein–RNA interactions for Protein: Q3LRV9

Treml4, Trem-like transcript 4 protein, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml4Q3LRV9 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Treml4Q3LRV9 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Treml4Q3LRV9 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.32■□□□□ 0.84
Treml4Q3LRV9 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Treml4Q3LRV9 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Treml4Q3LRV9 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Treml4Q3LRV9 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Treml4Q3LRV9 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Treml4Q3LRV9 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Treml4Q3LRV9 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Treml4Q3LRV9 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Treml4Q3LRV9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Treml4Q3LRV9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Treml4Q3LRV9 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Treml4Q3LRV9 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Treml4Q3LRV9 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Treml4Q3LRV9 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Treml4Q3LRV9 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Treml4Q3LRV9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.29■□□□□ 0.84
Treml4Q3LRV9 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.29■□□□□ 0.84
Treml4Q3LRV9 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
Treml4Q3LRV9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Treml4Q3LRV9 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.28■□□□□ 0.84
Treml4Q3LRV9 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.28■□□□□ 0.84
Treml4Q3LRV9 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.28■□□□□ 0.84
Treml4Q3LRV9 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Treml4Q3LRV9 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Treml4Q3LRV9 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Treml4Q3LRV9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.28■□□□□ 0.84
Treml4Q3LRV9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Treml4Q3LRV9 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Treml4Q3LRV9 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Treml4Q3LRV9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Treml4Q3LRV9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Treml4Q3LRV9 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Treml4Q3LRV9 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Treml4Q3LRV9 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.25■□□□□ 0.83
Treml4Q3LRV9 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Treml4Q3LRV9 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Treml4Q3LRV9 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.25■□□□□ 0.83
Treml4Q3LRV9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.25■□□□□ 0.83
Treml4Q3LRV9 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.25■□□□□ 0.83
Treml4Q3LRV9 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Treml4Q3LRV9 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Treml4Q3LRV9 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Treml4Q3LRV9 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Treml4Q3LRV9 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Treml4Q3LRV9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Treml4Q3LRV9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Treml4Q3LRV9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.24■□□□□ 0.83
Treml4Q3LRV9 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.24■□□□□ 0.83
Treml4Q3LRV9 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Treml4Q3LRV9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Treml4Q3LRV9 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Treml4Q3LRV9 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Treml4Q3LRV9 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.23■□□□□ 0.83
Treml4Q3LRV9 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Treml4Q3LRV9 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Treml4Q3LRV9 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Treml4Q3LRV9 Gm9847-201ENSMUST00000052528 599 ntBASIC20.23■□□□□ 0.83
Treml4Q3LRV9 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Treml4Q3LRV9 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Treml4Q3LRV9 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Treml4Q3LRV9 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Treml4Q3LRV9 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.22■□□□□ 0.83
Treml4Q3LRV9 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Treml4Q3LRV9 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Treml4Q3LRV9 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Treml4Q3LRV9 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Treml4Q3LRV9 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
Treml4Q3LRV9 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Treml4Q3LRV9 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Treml4Q3LRV9 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
Treml4Q3LRV9 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Treml4Q3LRV9 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Treml4Q3LRV9 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Treml4Q3LRV9 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Treml4Q3LRV9 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Treml4Q3LRV9 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Treml4Q3LRV9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
Treml4Q3LRV9 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.19■□□□□ 0.82
Treml4Q3LRV9 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Treml4Q3LRV9 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Treml4Q3LRV9 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Treml4Q3LRV9 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Treml4Q3LRV9 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Treml4Q3LRV9 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Treml4Q3LRV9 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Treml4Q3LRV9 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Treml4Q3LRV9 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Treml4Q3LRV9 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Treml4Q3LRV9 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Treml4Q3LRV9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.16■□□□□ 0.82
Treml4Q3LRV9 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.16■□□□□ 0.82
Treml4Q3LRV9 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Treml4Q3LRV9 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Treml4Q3LRV9 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Treml4Q3LRV9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.15■□□□□ 0.82
Treml4Q3LRV9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Treml4Q3LRV9 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms