Protein–RNA interactions for Protein: Q2WF71

Lrfn1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, mousemouse

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrfn1Q2WF71 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lrfn1Q2WF71 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Lrfn1Q2WF71 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lrfn1Q2WF71 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lrfn1Q2WF71 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.74■□□□□ 0.75
Lrfn1Q2WF71 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Lrfn1Q2WF71 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lrfn1Q2WF71 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Lrfn1Q2WF71 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lrfn1Q2WF71 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Lrfn1Q2WF71 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Lrfn1Q2WF71 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lrfn1Q2WF71 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lrfn1Q2WF71 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lrfn1Q2WF71 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lrfn1Q2WF71 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Lrfn1Q2WF71 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Lrfn1Q2WF71 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lrfn1Q2WF71 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lrfn1Q2WF71 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lrfn1Q2WF71 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Lrfn1Q2WF71 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lrfn1Q2WF71 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lrfn1Q2WF71 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lrfn1Q2WF71 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lrfn1Q2WF71 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lrfn1Q2WF71 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.7■□□□□ 0.74
Lrfn1Q2WF71 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.7■□□□□ 0.74
Lrfn1Q2WF71 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lrfn1Q2WF71 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lrfn1Q2WF71 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.69■□□□□ 0.74
Lrfn1Q2WF71 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Lrfn1Q2WF71 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lrfn1Q2WF71 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lrfn1Q2WF71 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Lrfn1Q2WF71 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lrfn1Q2WF71 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lrfn1Q2WF71 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lrfn1Q2WF71 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Lrfn1Q2WF71 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lrfn1Q2WF71 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lrfn1Q2WF71 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Lrfn1Q2WF71 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Lrfn1Q2WF71 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Lrfn1Q2WF71 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.68■□□□□ 0.74
Lrfn1Q2WF71 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lrfn1Q2WF71 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lrfn1Q2WF71 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lrfn1Q2WF71 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.68■□□□□ 0.74
Lrfn1Q2WF71 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Lrfn1Q2WF71 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Lrfn1Q2WF71 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lrfn1Q2WF71 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Lrfn1Q2WF71 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Lrfn1Q2WF71 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lrfn1Q2WF71 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lrfn1Q2WF71 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lrfn1Q2WF71 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.66■□□□□ 0.74
Lrfn1Q2WF71 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lrfn1Q2WF71 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lrfn1Q2WF71 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lrfn1Q2WF71 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lrfn1Q2WF71 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.65■□□□□ 0.74
Lrfn1Q2WF71 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lrfn1Q2WF71 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lrfn1Q2WF71 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lrfn1Q2WF71 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Lrfn1Q2WF71 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.64■□□□□ 0.74
Lrfn1Q2WF71 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Lrfn1Q2WF71 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Lrfn1Q2WF71 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Lrfn1Q2WF71 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lrfn1Q2WF71 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Lrfn1Q2WF71 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lrfn1Q2WF71 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Lrfn1Q2WF71 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.63■□□□□ 0.73
Lrfn1Q2WF71 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lrfn1Q2WF71 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Lrfn1Q2WF71 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Lrfn1Q2WF71 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lrfn1Q2WF71 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lrfn1Q2WF71 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.62■□□□□ 0.73
Lrfn1Q2WF71 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lrfn1Q2WF71 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Lrfn1Q2WF71 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Lrfn1Q2WF71 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Lrfn1Q2WF71 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lrfn1Q2WF71 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lrfn1Q2WF71 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Lrfn1Q2WF71 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lrfn1Q2WF71 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Lrfn1Q2WF71 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lrfn1Q2WF71 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.6■□□□□ 0.73
Lrfn1Q2WF71 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lrfn1Q2WF71 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lrfn1Q2WF71 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lrfn1Q2WF71 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.6■□□□□ 0.73
Lrfn1Q2WF71 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lrfn1Q2WF71 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Lrfn1Q2WF71 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms