Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ptchd3Q0EEE2 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ptchd3Q0EEE2 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ptchd3Q0EEE2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.73■□□□□ 0.91
Ptchd3Q0EEE2 Gm6311-201ENSMUST00000073790 878 ntBASIC20.73■□□□□ 0.91
Ptchd3Q0EEE2 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.73■□□□□ 0.91
Ptchd3Q0EEE2 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ptchd3Q0EEE2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ptchd3Q0EEE2 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
Ptchd3Q0EEE2 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.72■□□□□ 0.91
Ptchd3Q0EEE2 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.72■□□□□ 0.91
Ptchd3Q0EEE2 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ptchd3Q0EEE2 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.72■□□□□ 0.91
Ptchd3Q0EEE2 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Ptchd3Q0EEE2 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.72■□□□□ 0.91
Ptchd3Q0EEE2 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
Ptchd3Q0EEE2 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ptchd3Q0EEE2 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ptchd3Q0EEE2 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Ptchd3Q0EEE2 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Ptchd3Q0EEE2 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.71■□□□□ 0.91
Ptchd3Q0EEE2 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ptchd3Q0EEE2 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ptchd3Q0EEE2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ptchd3Q0EEE2 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ptchd3Q0EEE2 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.7■□□□□ 0.9
Ptchd3Q0EEE2 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ptchd3Q0EEE2 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.7■□□□□ 0.9
Ptchd3Q0EEE2 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ptchd3Q0EEE2 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Ptchd3Q0EEE2 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Ptchd3Q0EEE2 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Ptchd3Q0EEE2 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.69■□□□□ 0.9
Ptchd3Q0EEE2 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ptchd3Q0EEE2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ptchd3Q0EEE2 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.68■□□□□ 0.9
Ptchd3Q0EEE2 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ptchd3Q0EEE2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ptchd3Q0EEE2 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.68■□□□□ 0.9
Ptchd3Q0EEE2 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ptchd3Q0EEE2 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ptchd3Q0EEE2 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.67■□□□□ 0.9
Ptchd3Q0EEE2 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ptchd3Q0EEE2 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ptchd3Q0EEE2 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ptchd3Q0EEE2 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ptchd3Q0EEE2 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ptchd3Q0EEE2 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ptchd3Q0EEE2 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ptchd3Q0EEE2 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ptchd3Q0EEE2 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.66■□□□□ 0.9
Ptchd3Q0EEE2 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.66■□□□□ 0.9
Ptchd3Q0EEE2 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.66■□□□□ 0.9
Ptchd3Q0EEE2 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ptchd3Q0EEE2 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ptchd3Q0EEE2 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ptchd3Q0EEE2 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.65■□□□□ 0.9
Ptchd3Q0EEE2 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Ptchd3Q0EEE2 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ptchd3Q0EEE2 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Ptchd3Q0EEE2 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Ptchd3Q0EEE2 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ptchd3Q0EEE2 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ptchd3Q0EEE2 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
Ptchd3Q0EEE2 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ptchd3Q0EEE2 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ptchd3Q0EEE2 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ptchd3Q0EEE2 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ptchd3Q0EEE2 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ptchd3Q0EEE2 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ptchd3Q0EEE2 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ptchd3Q0EEE2 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ptchd3Q0EEE2 Terc-201ENSMUST00000082862 423 ntBASIC20.63■□□□□ 0.89
Ptchd3Q0EEE2 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ptchd3Q0EEE2 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ptchd3Q0EEE2 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
Ptchd3Q0EEE2 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptchd3Q0EEE2 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptchd3Q0EEE2 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptchd3Q0EEE2 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.62■□□□□ 0.89
Ptchd3Q0EEE2 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptchd3Q0EEE2 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.61■□□□□ 0.89
Ptchd3Q0EEE2 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ptchd3Q0EEE2 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ptchd3Q0EEE2 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ptchd3Q0EEE2 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ptchd3Q0EEE2 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Ptchd3Q0EEE2 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ptchd3Q0EEE2 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ptchd3Q0EEE2 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ptchd3Q0EEE2 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ptchd3Q0EEE2 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.6■□□□□ 0.89
Ptchd3Q0EEE2 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.6■□□□□ 0.89
Ptchd3Q0EEE2 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ptchd3Q0EEE2 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Ptchd3Q0EEE2 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.59■□□□□ 0.89
Ptchd3Q0EEE2 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Ptchd3Q0EEE2 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ptchd3Q0EEE2 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ptchd3Q0EEE2 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms