Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Chd8Q09XV5 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.21■□□□□ 0.83
Chd8Q09XV5 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Chd8Q09XV5 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chd8Q09XV5 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chd8Q09XV5 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.21■□□□□ 0.83
Chd8Q09XV5 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chd8Q09XV5 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Chd8Q09XV5 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chd8Q09XV5 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Chd8Q09XV5 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chd8Q09XV5 Mir7071-201ENSMUST00000184847 69 ntBASIC20.19■□□□□ 0.82
Chd8Q09XV5 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.19■□□□□ 0.82
Chd8Q09XV5 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chd8Q09XV5 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chd8Q09XV5 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chd8Q09XV5 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chd8Q09XV5 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.18■□□□□ 0.82
Chd8Q09XV5 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Chd8Q09XV5 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chd8Q09XV5 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Chd8Q09XV5 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.17■□□□□ 0.82
Chd8Q09XV5 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.17■□□□□ 0.82
Chd8Q09XV5 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.17■□□□□ 0.82
Chd8Q09XV5 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Chd8Q09XV5 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chd8Q09XV5 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chd8Q09XV5 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chd8Q09XV5 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Chd8Q09XV5 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chd8Q09XV5 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.16■□□□□ 0.82
Chd8Q09XV5 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Chd8Q09XV5 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
Chd8Q09XV5 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chd8Q09XV5 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chd8Q09XV5 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chd8Q09XV5 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Chd8Q09XV5 Gm10493-201ENSMUST00000097270 612 ntBASIC20.15■□□□□ 0.82
Chd8Q09XV5 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.15■□□□□ 0.82
Chd8Q09XV5 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Chd8Q09XV5 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Chd8Q09XV5 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Chd8Q09XV5 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.14■□□□□ 0.81
Chd8Q09XV5 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Chd8Q09XV5 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.13■□□□□ 0.81
Chd8Q09XV5 Gm10252-201ENSMUST00000209541 832 ntBASIC20.13■□□□□ 0.81
Chd8Q09XV5 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chd8Q09XV5 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chd8Q09XV5 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chd8Q09XV5 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chd8Q09XV5 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chd8Q09XV5 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Chd8Q09XV5 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chd8Q09XV5 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
Chd8Q09XV5 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Chd8Q09XV5 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chd8Q09XV5 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chd8Q09XV5 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Chd8Q09XV5 AC130671.1-201ENSMUST00000227384 1237 ntBASIC20.12■□□□□ 0.81
Chd8Q09XV5 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Chd8Q09XV5 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.11■□□□□ 0.81
Chd8Q09XV5 Gm10399-202ENSMUST00000202768 748 ntBASIC20.11■□□□□ 0.81
Chd8Q09XV5 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chd8Q09XV5 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.1■□□□□ 0.81
Chd8Q09XV5 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.1■□□□□ 0.81
Chd8Q09XV5 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chd8Q09XV5 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Chd8Q09XV5 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chd8Q09XV5 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Chd8Q09XV5 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.09■□□□□ 0.81
Chd8Q09XV5 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Chd8Q09XV5 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.09■□□□□ 0.81
Chd8Q09XV5 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Chd8Q09XV5 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Chd8Q09XV5 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.08■□□□□ 0.8
Chd8Q09XV5 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Chd8Q09XV5 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chd8Q09XV5 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Chd8Q09XV5 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.06■□□□□ 0.8
Chd8Q09XV5 Gm43017-201ENSMUST00000198296 752 ntBASIC20.06■□□□□ 0.8
Chd8Q09XV5 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Chd8Q09XV5 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chd8Q09XV5 Nespas-201ENSMUST00000143738 1083 ntBASIC20.06■□□□□ 0.8
Chd8Q09XV5 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chd8Q09XV5 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chd8Q09XV5 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Chd8Q09XV5 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chd8Q09XV5 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Chd8Q09XV5 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
Chd8Q09XV5 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chd8Q09XV5 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chd8Q09XV5 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Chd8Q09XV5 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.04■□□□□ 0.8
Chd8Q09XV5 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chd8Q09XV5 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chd8Q09XV5 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chd8Q09XV5 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chd8Q09XV5 Gm8493-201ENSMUST00000196881 489 ntBASIC20.03■□□□□ 0.8
Chd8Q09XV5 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chd8Q09XV5 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms