Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
Hoxc4Q08624 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hoxc4Q08624 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hoxc4Q08624 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hoxc4Q08624 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hoxc4Q08624 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.02■□□□□ 0.96
Hoxc4Q08624 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.02■□□□□ 0.96
Hoxc4Q08624 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Hoxc4Q08624 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.02■□□□□ 0.96
Hoxc4Q08624 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Hoxc4Q08624 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hoxc4Q08624 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hoxc4Q08624 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Hoxc4Q08624 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.01■□□□□ 0.95
Hoxc4Q08624 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Hoxc4Q08624 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hoxc4Q08624 Gm14117-201ENSMUST00000122417 843 ntBASIC21.01■□□□□ 0.95
Hoxc4Q08624 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.01■□□□□ 0.95
Hoxc4Q08624 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
Hoxc4Q08624 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Hoxc4Q08624 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hoxc4Q08624 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hoxc4Q08624 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hoxc4Q08624 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21■□□□□ 0.95
Hoxc4Q08624 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Hoxc4Q08624 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21■□□□□ 0.95
Hoxc4Q08624 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hoxc4Q08624 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hoxc4Q08624 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21■□□□□ 0.95
Hoxc4Q08624 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21■□□□□ 0.95
Hoxc4Q08624 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21■□□□□ 0.95
Hoxc4Q08624 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hoxc4Q08624 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.99■□□□□ 0.95
Hoxc4Q08624 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hoxc4Q08624 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Hoxc4Q08624 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.98■□□□□ 0.95
Hoxc4Q08624 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hoxc4Q08624 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Hoxc4Q08624 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.98■□□□□ 0.95
Hoxc4Q08624 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.98■□□□□ 0.95
Hoxc4Q08624 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hoxc4Q08624 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hoxc4Q08624 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hoxc4Q08624 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxc4Q08624 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxc4Q08624 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxc4Q08624 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Hoxc4Q08624 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.97■□□□□ 0.95
Hoxc4Q08624 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.97■□□□□ 0.95
Hoxc4Q08624 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hoxc4Q08624 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hoxc4Q08624 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.96■□□□□ 0.95
Hoxc4Q08624 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.96■□□□□ 0.95
Hoxc4Q08624 Etf1-202ENSMUST00000180351 108 ntBASIC20.96■□□□□ 0.95
Hoxc4Q08624 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hoxc4Q08624 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Hoxc4Q08624 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hoxc4Q08624 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Hoxc4Q08624 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hoxc4Q08624 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hoxc4Q08624 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hoxc4Q08624 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hoxc4Q08624 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hoxc4Q08624 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxc4Q08624 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxc4Q08624 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.94■□□□□ 0.94
Hoxc4Q08624 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Hoxc4Q08624 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxc4Q08624 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxc4Q08624 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxc4Q08624 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxc4Q08624 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxc4Q08624 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hoxc4Q08624 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hoxc4Q08624 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hoxc4Q08624 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hoxc4Q08624 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Hoxc4Q08624 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hoxc4Q08624 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hoxc4Q08624 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Hoxc4Q08624 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.91■□□□□ 0.94
Hoxc4Q08624 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hoxc4Q08624 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hoxc4Q08624 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Hoxc4Q08624 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxc4Q08624 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Hoxc4Q08624 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.9■□□□□ 0.94
Hoxc4Q08624 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxc4Q08624 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
Hoxc4Q08624 Gm10399-202ENSMUST00000202768 748 ntBASIC20.9■□□□□ 0.94
Hoxc4Q08624 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.9■□□□□ 0.94
Hoxc4Q08624 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.9■□□□□ 0.94
Hoxc4Q08624 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.9■□□□□ 0.94
Hoxc4Q08624 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxc4Q08624 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hoxc4Q08624 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Hoxc4Q08624 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Hoxc4Q08624 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hoxc4Q08624 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hoxc4Q08624 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms