Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SgcbP82349 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
SgcbP82349 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SgcbP82349 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SgcbP82349 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SgcbP82349 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SgcbP82349 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SgcbP82349 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SgcbP82349 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SgcbP82349 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SgcbP82349 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SgcbP82349 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.23■□□□□ 0.67
SgcbP82349 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SgcbP82349 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SgcbP82349 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.22■□□□□ 0.67
SgcbP82349 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.22■□□□□ 0.67
SgcbP82349 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SgcbP82349 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
SgcbP82349 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SgcbP82349 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SgcbP82349 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SgcbP82349 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.22■□□□□ 0.67
SgcbP82349 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SgcbP82349 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SgcbP82349 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.22■□□□□ 0.67
SgcbP82349 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SgcbP82349 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SgcbP82349 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.21■□□□□ 0.67
SgcbP82349 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SgcbP82349 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SgcbP82349 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SgcbP82349 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SgcbP82349 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.2■□□□□ 0.66
SgcbP82349 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SgcbP82349 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SgcbP82349 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SgcbP82349 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SgcbP82349 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SgcbP82349 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.19■□□□□ 0.66
SgcbP82349 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.19■□□□□ 0.66
SgcbP82349 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SgcbP82349 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SgcbP82349 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SgcbP82349 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SgcbP82349 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SgcbP82349 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SgcbP82349 Gm45444-201ENSMUST00000211394 898 ntBASIC19.18■□□□□ 0.66
SgcbP82349 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SgcbP82349 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SgcbP82349 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SgcbP82349 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SgcbP82349 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SgcbP82349 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SgcbP82349 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SgcbP82349 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SgcbP82349 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SgcbP82349 Gm22567-201ENSMUST00000175542 342 ntBASIC19.16■□□□□ 0.66
SgcbP82349 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.16■□□□□ 0.66
SgcbP82349 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SgcbP82349 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SgcbP82349 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SgcbP82349 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SgcbP82349 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SgcbP82349 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SgcbP82349 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SgcbP82349 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.15■□□□□ 0.66
SgcbP82349 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SgcbP82349 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SgcbP82349 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SgcbP82349 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SgcbP82349 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
SgcbP82349 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SgcbP82349 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
SgcbP82349 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SgcbP82349 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
SgcbP82349 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SgcbP82349 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SgcbP82349 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
SgcbP82349 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SgcbP82349 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SgcbP82349 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SgcbP82349 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SgcbP82349 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SgcbP82349 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.13■□□□□ 0.65
SgcbP82349 Gm43566-201ENSMUST00000196851 808 ntBASIC19.13■□□□□ 0.65
SgcbP82349 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SgcbP82349 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SgcbP82349 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SgcbP82349 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SgcbP82349 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SgcbP82349 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SgcbP82349 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SgcbP82349 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SgcbP82349 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SgcbP82349 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SgcbP82349 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.12■□□□□ 0.65
SgcbP82349 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
SgcbP82349 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SgcbP82349 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SgcbP82349 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms