Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cks1bP61025 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cks1bP61025 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cks1bP61025 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cks1bP61025 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cks1bP61025 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC15.22■□□□□ 0.03
Cks1bP61025 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC15.22■□□□□ 0.03
Cks1bP61025 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cks1bP61025 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC15.21■□□□□ 0.03
Cks1bP61025 Gm15043-201ENSMUST00000118843 1543 ntBASIC15.21■□□□□ 0.03
Cks1bP61025 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cks1bP61025 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Cks1bP61025 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cks1bP61025 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cks1bP61025 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cks1bP61025 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cks1bP61025 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cks1bP61025 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cks1bP61025 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cks1bP61025 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cks1bP61025 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cks1bP61025 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cks1bP61025 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cks1bP61025 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cks1bP61025 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cks1bP61025 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cks1bP61025 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cks1bP61025 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cks1bP61025 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cks1bP61025 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cks1bP61025 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cks1bP61025 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cks1bP61025 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cks1bP61025 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cks1bP61025 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cks1bP61025 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cks1bP61025 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cks1bP61025 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Cks1bP61025 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cks1bP61025 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cks1bP61025 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC15.17■□□□□ 0.02
Cks1bP61025 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cks1bP61025 Hsf1-207ENSMUST00000228371 2102 ntBASIC15.17■□□□□ 0.02
Cks1bP61025 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cks1bP61025 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cks1bP61025 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cks1bP61025 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cks1bP61025 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cks1bP61025 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cks1bP61025 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cks1bP61025 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cks1bP61025 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cks1bP61025 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cks1bP61025 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC15.15■□□□□ 0.02
Cks1bP61025 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cks1bP61025 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cks1bP61025 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cks1bP61025 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Cks1bP61025 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cks1bP61025 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Cks1bP61025 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cks1bP61025 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.14■□□□□ 0.01
Cks1bP61025 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC15.14■□□□□ 0.01
Cks1bP61025 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cks1bP61025 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Cks1bP61025 Gm43006-201ENSMUST00000197702 1602 ntBASIC15.14■□□□□ 0.01
Cks1bP61025 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cks1bP61025 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cks1bP61025 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Cks1bP61025 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cks1bP61025 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
Cks1bP61025 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cks1bP61025 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cks1bP61025 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cks1bP61025 Gm14121-201ENSMUST00000121441 1380 ntBASIC15.12■□□□□ 0.01
Cks1bP61025 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cks1bP61025 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cks1bP61025 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cks1bP61025 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cks1bP61025 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Cks1bP61025 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cks1bP61025 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cks1bP61025 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cks1bP61025 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cks1bP61025 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cks1bP61025 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cks1bP61025 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cks1bP61025 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Cks1bP61025 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cks1bP61025 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cks1bP61025 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cks1bP61025 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cks1bP61025 Gm4419-202ENSMUST00000226239 1431 ntBASIC15.11■□□□□ 0.01
Cks1bP61025 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cks1bP61025 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Cks1bP61025 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cks1bP61025 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cks1bP61025 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cks1bP61025 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cks1bP61025 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms