Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Cdkn2bP55271 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cdkn2bP55271 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.75■□□□□ 0.91
Cdkn2bP55271 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cdkn2bP55271 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Cdkn2bP55271 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cdkn2bP55271 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cdkn2bP55271 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Cdkn2bP55271 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdkn2bP55271 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdkn2bP55271 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdkn2bP55271 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.73■□□□□ 0.91
Cdkn2bP55271 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdkn2bP55271 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdkn2bP55271 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cdkn2bP55271 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
Cdkn2bP55271 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
Cdkn2bP55271 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdkn2bP55271 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cdkn2bP55271 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdkn2bP55271 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Cdkn2bP55271 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cdkn2bP55271 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdkn2bP55271 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdkn2bP55271 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cdkn2bP55271 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdkn2bP55271 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Cdkn2bP55271 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdkn2bP55271 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdkn2bP55271 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Cdkn2bP55271 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdkn2bP55271 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Cdkn2bP55271 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Cdkn2bP55271 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdkn2bP55271 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
Cdkn2bP55271 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cdkn2bP55271 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.69■□□□□ 0.9
Cdkn2bP55271 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdkn2bP55271 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Cdkn2bP55271 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdkn2bP55271 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
Cdkn2bP55271 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Cdkn2bP55271 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdkn2bP55271 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.68■□□□□ 0.9
Cdkn2bP55271 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.68■□□□□ 0.9
Cdkn2bP55271 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdkn2bP55271 Gm44428-201ENSMUST00000204474 874 ntBASIC20.68■□□□□ 0.9
Cdkn2bP55271 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdkn2bP55271 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdkn2bP55271 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Cdkn2bP55271 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdkn2bP55271 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdkn2bP55271 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cdkn2bP55271 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.67■□□□□ 0.9
Cdkn2bP55271 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdkn2bP55271 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.67■□□□□ 0.9
Cdkn2bP55271 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdkn2bP55271 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdkn2bP55271 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.66■□□□□ 0.9
Cdkn2bP55271 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdkn2bP55271 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdkn2bP55271 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cdkn2bP55271 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdkn2bP55271 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdkn2bP55271 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cdkn2bP55271 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.65■□□□□ 0.9
Cdkn2bP55271 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdkn2bP55271 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdkn2bP55271 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.64■□□□□ 0.9
Cdkn2bP55271 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Cdkn2bP55271 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Cdkn2bP55271 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.64■□□□□ 0.9
Cdkn2bP55271 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Cdkn2bP55271 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdkn2bP55271 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdkn2bP55271 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdkn2bP55271 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.89
Cdkn2bP55271 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdkn2bP55271 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdkn2bP55271 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdkn2bP55271 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdkn2bP55271 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdkn2bP55271 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdkn2bP55271 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.63■□□□□ 0.89
Cdkn2bP55271 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.63■□□□□ 0.89
Cdkn2bP55271 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Cdkn2bP55271 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdkn2bP55271 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdkn2bP55271 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdkn2bP55271 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cdkn2bP55271 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Cdkn2bP55271 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdkn2bP55271 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdkn2bP55271 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdkn2bP55271 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdkn2bP55271 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdkn2bP55271 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdkn2bP55271 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdkn2bP55271 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdkn2bP55271 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms