Protein–RNA interactions for Protein: P51642

Cntf, Ciliary neurotrophic factor, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CntfP51642 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CntfP51642 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CntfP51642 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.22■□□□□ 0.83
CntfP51642 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.22■□□□□ 0.83
CntfP51642 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CntfP51642 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.22■□□□□ 0.83
CntfP51642 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CntfP51642 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CntfP51642 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CntfP51642 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CntfP51642 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CntfP51642 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.21■□□□□ 0.83
CntfP51642 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CntfP51642 Gm6311-201ENSMUST00000073790 878 ntBASIC20.21■□□□□ 0.83
CntfP51642 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.21■□□□□ 0.83
CntfP51642 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CntfP51642 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CntfP51642 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CntfP51642 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CntfP51642 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CntfP51642 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CntfP51642 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CntfP51642 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CntfP51642 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CntfP51642 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CntfP51642 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CntfP51642 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CntfP51642 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CntfP51642 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CntfP51642 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.18■□□□□ 0.82
CntfP51642 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CntfP51642 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CntfP51642 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CntfP51642 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CntfP51642 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CntfP51642 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.17■□□□□ 0.82
CntfP51642 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CntfP51642 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CntfP51642 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.16■□□□□ 0.82
CntfP51642 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.16■□□□□ 0.82
CntfP51642 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CntfP51642 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.16■□□□□ 0.82
CntfP51642 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CntfP51642 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CntfP51642 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CntfP51642 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CntfP51642 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CntfP51642 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CntfP51642 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CntfP51642 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CntfP51642 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CntfP51642 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.15■□□□□ 0.82
CntfP51642 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.15■□□□□ 0.82
CntfP51642 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CntfP51642 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CntfP51642 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CntfP51642 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.14■□□□□ 0.81
CntfP51642 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CntfP51642 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
CntfP51642 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CntfP51642 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CntfP51642 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CntfP51642 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CntfP51642 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CntfP51642 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CntfP51642 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CntfP51642 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CntfP51642 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CntfP51642 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CntfP51642 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CntfP51642 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CntfP51642 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CntfP51642 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CntfP51642 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CntfP51642 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CntfP51642 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CntfP51642 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.12■□□□□ 0.81
CntfP51642 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CntfP51642 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CntfP51642 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CntfP51642 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.12■□□□□ 0.81
CntfP51642 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CntfP51642 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
CntfP51642 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CntfP51642 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.11■□□□□ 0.81
CntfP51642 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CntfP51642 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CntfP51642 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CntfP51642 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CntfP51642 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CntfP51642 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CntfP51642 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CntfP51642 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.1■□□□□ 0.81
CntfP51642 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.1■□□□□ 0.81
CntfP51642 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CntfP51642 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CntfP51642 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.09■□□□□ 0.81
CntfP51642 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CntfP51642 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CntfP51642 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms