Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Xcl1P47993 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Xcl1P47993 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
Xcl1P47993 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Xcl1P47993 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Xcl1P47993 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Xcl1P47993 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Xcl1P47993 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Xcl1P47993 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Xcl1P47993 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Xcl1P47993 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Xcl1P47993 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Xcl1P47993 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Xcl1P47993 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Xcl1P47993 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Xcl1P47993 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Xcl1P47993 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Xcl1P47993 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Xcl1P47993 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Xcl1P47993 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Xcl1P47993 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Xcl1P47993 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Xcl1P47993 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Xcl1P47993 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC14.18□□□□□ -0.14
Xcl1P47993 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Xcl1P47993 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Xcl1P47993 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Xcl1P47993 Gm37847-201ENSMUST00000192163 1497 ntBASIC14.18□□□□□ -0.14
Xcl1P47993 Gm31748-201ENSMUST00000194938 1497 ntBASIC14.18□□□□□ -0.14
Xcl1P47993 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Xcl1P47993 Particl-201ENSMUST00000205370 1560 ntBASIC14.17□□□□□ -0.14
Xcl1P47993 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Xcl1P47993 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Xcl1P47993 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Xcl1P47993 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Xcl1P47993 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Xcl1P47993 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Xcl1P47993 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Xcl1P47993 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Xcl1P47993 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Xcl1P47993 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Xcl1P47993 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Xcl1P47993 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Xcl1P47993 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Xcl1P47993 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Xcl1P47993 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Xcl1P47993 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Xcl1P47993 Iqck-206ENSMUST00000208658 2891 ntBASIC14.16□□□□□ -0.14
Xcl1P47993 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Xcl1P47993 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Xcl1P47993 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Xcl1P47993 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Xcl1P47993 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Xcl1P47993 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Xcl1P47993 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Xcl1P47993 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Xcl1P47993 Gm25262-201ENSMUST00000174934 133 ntBASIC14.15□□□□□ -0.14
Xcl1P47993 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Xcl1P47993 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Xcl1P47993 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Xcl1P47993 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Xcl1P47993 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Xcl1P47993 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Xcl1P47993 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Xcl1P47993 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Xcl1P47993 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Xcl1P47993 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Xcl1P47993 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Xcl1P47993 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Xcl1P47993 Dapk1-207ENSMUST00000226059 5009 ntBASIC14.14□□□□□ -0.15
Xcl1P47993 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Xcl1P47993 Gm4430-201ENSMUST00000192413 1943 ntBASIC14.13□□□□□ -0.15
Xcl1P47993 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Xcl1P47993 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Xcl1P47993 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Xcl1P47993 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Xcl1P47993 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Xcl1P47993 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Xcl1P47993 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Xcl1P47993 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Xcl1P47993 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Xcl1P47993 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Xcl1P47993 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Xcl1P47993 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Xcl1P47993 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.12□□□□□ -0.15
Xcl1P47993 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Xcl1P47993 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Xcl1P47993 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Xcl1P47993 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Xcl1P47993 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Xcl1P47993 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Xcl1P47993 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Xcl1P47993 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Xcl1P47993 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Xcl1P47993 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Xcl1P47993 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Xcl1P47993 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Xcl1P47993 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Xcl1P47993 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC14.11□□□□□ -0.15
Xcl1P47993 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 98.8 ms