Protein–RNA interactions for Protein: P47955

Rplp1, 60S acidic ribosomal protein P1, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rplp1P47955 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Rplp1P47955 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rplp1P47955 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rplp1P47955 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rplp1P47955 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.59■□□□□ 0.41
Rplp1P47955 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Rplp1P47955 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Rplp1P47955 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Rplp1P47955 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.59■□□□□ 0.41
Rplp1P47955 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rplp1P47955 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Rplp1P47955 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.59■□□□□ 0.41
Rplp1P47955 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.59■□□□□ 0.41
Rplp1P47955 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rplp1P47955 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Rplp1P47955 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rplp1P47955 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Rplp1P47955 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rplp1P47955 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rplp1P47955 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rplp1P47955 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rplp1P47955 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rplp1P47955 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rplp1P47955 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rplp1P47955 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.58■□□□□ 0.4
Rplp1P47955 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rplp1P47955 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rplp1P47955 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Rplp1P47955 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rplp1P47955 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Rplp1P47955 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rplp1P47955 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rplp1P47955 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rplp1P47955 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rplp1P47955 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.56■□□□□ 0.4
Rplp1P47955 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rplp1P47955 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rplp1P47955 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rplp1P47955 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Rplp1P47955 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Rplp1P47955 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.56■□□□□ 0.4
Rplp1P47955 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Rplp1P47955 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rplp1P47955 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Rplp1P47955 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rplp1P47955 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rplp1P47955 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rplp1P47955 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rplp1P47955 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rplp1P47955 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rplp1P47955 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rplp1P47955 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rplp1P47955 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rplp1P47955 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rplp1P47955 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Rplp1P47955 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Rplp1P47955 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.54■□□□□ 0.4
Rplp1P47955 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rplp1P47955 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Rplp1P47955 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rplp1P47955 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rplp1P47955 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Rplp1P47955 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.54■□□□□ 0.4
Rplp1P47955 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
Rplp1P47955 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rplp1P47955 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rplp1P47955 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rplp1P47955 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.53■□□□□ 0.4
Rplp1P47955 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rplp1P47955 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rplp1P47955 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Rplp1P47955 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Rplp1P47955 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rplp1P47955 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rplp1P47955 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rplp1P47955 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Rplp1P47955 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Rplp1P47955 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Rplp1P47955 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rplp1P47955 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rplp1P47955 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rplp1P47955 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rplp1P47955 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rplp1P47955 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rplp1P47955 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rplp1P47955 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Rplp1P47955 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rplp1P47955 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rplp1P47955 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rplp1P47955 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rplp1P47955 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.51■□□□□ 0.39
Rplp1P47955 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rplp1P47955 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Rplp1P47955 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rplp1P47955 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Rplp1P47955 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Rplp1P47955 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rplp1P47955 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rplp1P47955 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rplp1P47955 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms