Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.72■□□□□ 0.43
Hist1h1aP43275 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Hist1h1aP43275 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.72■□□□□ 0.43
Hist1h1aP43275 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hist1h1aP43275 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Hist1h1aP43275 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Hist1h1aP43275 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Hist1h1aP43275 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hist1h1aP43275 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hist1h1aP43275 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hist1h1aP43275 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hist1h1aP43275 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hist1h1aP43275 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Hist1h1aP43275 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hist1h1aP43275 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hist1h1aP43275 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Hist1h1aP43275 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hist1h1aP43275 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Hist1h1aP43275 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hist1h1aP43275 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.7■□□□□ 0.42
Hist1h1aP43275 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hist1h1aP43275 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hist1h1aP43275 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hist1h1aP43275 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hist1h1aP43275 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
Hist1h1aP43275 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hist1h1aP43275 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hist1h1aP43275 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hist1h1aP43275 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hist1h1aP43275 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hist1h1aP43275 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hist1h1aP43275 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
Hist1h1aP43275 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hist1h1aP43275 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hist1h1aP43275 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hist1h1aP43275 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hist1h1aP43275 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hist1h1aP43275 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hist1h1aP43275 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hist1h1aP43275 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Hist1h1aP43275 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hist1h1aP43275 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hist1h1aP43275 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.67■□□□□ 0.42
Hist1h1aP43275 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Hist1h1aP43275 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hist1h1aP43275 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hist1h1aP43275 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hist1h1aP43275 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Hist1h1aP43275 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hist1h1aP43275 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hist1h1aP43275 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.66■□□□□ 0.42
Hist1h1aP43275 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hist1h1aP43275 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Hist1h1aP43275 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.65■□□□□ 0.42
Hist1h1aP43275 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Hist1h1aP43275 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.65■□□□□ 0.42
Hist1h1aP43275 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.65■□□□□ 0.42
Hist1h1aP43275 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.65■□□□□ 0.42
Hist1h1aP43275 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Hist1h1aP43275 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Hist1h1aP43275 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hist1h1aP43275 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hist1h1aP43275 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Hist1h1aP43275 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.64■□□□□ 0.41
Hist1h1aP43275 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hist1h1aP43275 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Hist1h1aP43275 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hist1h1aP43275 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Hist1h1aP43275 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hist1h1aP43275 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.63■□□□□ 0.41
Hist1h1aP43275 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hist1h1aP43275 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hist1h1aP43275 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hist1h1aP43275 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.63■□□□□ 0.41
Hist1h1aP43275 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hist1h1aP43275 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hist1h1aP43275 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hist1h1aP43275 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hist1h1aP43275 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hist1h1aP43275 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hist1h1aP43275 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hist1h1aP43275 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hist1h1aP43275 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hist1h1aP43275 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Hist1h1aP43275 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hist1h1aP43275 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Hist1h1aP43275 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hist1h1aP43275 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Hist1h1aP43275 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hist1h1aP43275 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hist1h1aP43275 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hist1h1aP43275 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hist1h1aP43275 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hist1h1aP43275 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hist1h1aP43275 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hist1h1aP43275 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Hist1h1aP43275 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hist1h1aP43275 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hist1h1aP43275 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hist1h1aP43275 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms