Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
P20040 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.08■□□□□ 0.64
P20040 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
P20040 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
P20040 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
P20040 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
P20040 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.07■□□□□ 0.64
P20040 Gm12366-201ENSMUST00000121722 873 ntBASIC19.07■□□□□ 0.64
P20040 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.07■□□□□ 0.64
P20040 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.07■□□□□ 0.64
P20040 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.07■□□□□ 0.64
P20040 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
P20040 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.07■□□□□ 0.64
P20040 Gm5786-201ENSMUST00000085368 882 ntBASIC19.07■□□□□ 0.64
P20040 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
P20040 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
P20040 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
P20040 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
P20040 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
P20040 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
P20040 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
P20040 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
P20040 Gm27502-201ENSMUST00000183495 199 ntBASIC19.06■□□□□ 0.64
P20040 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.06■□□□□ 0.64
P20040 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
P20040 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
P20040 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
P20040 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
P20040 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
P20040 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
P20040 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
P20040 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
P20040 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
P20040 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
P20040 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
P20040 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
P20040 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
P20040 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
P20040 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
P20040 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
P20040 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
P20040 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
P20040 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
P20040 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
P20040 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
P20040 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
P20040 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.03■□□□□ 0.64
P20040 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
P20040 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
P20040 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.03■□□□□ 0.64
P20040 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
P20040 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
P20040 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
P20040 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
P20040 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.02■□□□□ 0.64
P20040 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
P20040 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
P20040 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
P20040 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.01■□□□□ 0.63
P20040 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.01■□□□□ 0.63
P20040 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
P20040 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
P20040 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
P20040 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
P20040 Gm14523-201ENSMUST00000117260 558 ntBASIC19■□□□□ 0.63
P20040 Gm44428-201ENSMUST00000204474 874 ntBASIC19■□□□□ 0.63
P20040 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
P20040 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19■□□□□ 0.63
P20040 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19■□□□□ 0.63
P20040 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
P20040 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.99■□□□□ 0.63
P20040 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
P20040 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
P20040 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
P20040 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
P20040 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
P20040 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
P20040 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
P20040 Gm7332-201ENSMUST00000118351 454 ntBASIC18.98■□□□□ 0.63
P20040 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
P20040 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
P20040 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
P20040 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
P20040 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
P20040 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
P20040 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.97■□□□□ 0.63
P20040 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
P20040 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
P20040 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.97■□□□□ 0.63
P20040 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
P20040 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
P20040 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
P20040 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
P20040 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
P20040 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
P20040 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
P20040 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
P20040 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
P20040 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.96■□□□□ 0.63
P20040 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms