Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Hoxa9P09631 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Hoxa9P09631 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.81■■□□□ 1.08
Hoxa9P09631 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.81■■□□□ 1.08
Hoxa9P09631 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.81■■□□□ 1.08
Hoxa9P09631 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Hoxa9P09631 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.8■■□□□ 1.08
Hoxa9P09631 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
Hoxa9P09631 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hoxa9P09631 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.8■■□□□ 1.08
Hoxa9P09631 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.8■■□□□ 1.08
Hoxa9P09631 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.8■■□□□ 1.08
Hoxa9P09631 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Hoxa9P09631 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.79■■□□□ 1.08
Hoxa9P09631 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hoxa9P09631 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hoxa9P09631 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Hoxa9P09631 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hoxa9P09631 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Hoxa9P09631 Gm7417-201ENSMUST00000192950 473 ntBASIC21.79■■□□□ 1.08
Hoxa9P09631 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Hoxa9P09631 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hoxa9P09631 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hoxa9P09631 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hoxa9P09631 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hoxa9P09631 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.79■■□□□ 1.08
Hoxa9P09631 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
Hoxa9P09631 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Hoxa9P09631 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hoxa9P09631 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hoxa9P09631 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.78■■□□□ 1.08
Hoxa9P09631 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Hoxa9P09631 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hoxa9P09631 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Hoxa9P09631 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Hoxa9P09631 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.77■■□□□ 1.08
Hoxa9P09631 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Hoxa9P09631 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.77■■□□□ 1.07
Hoxa9P09631 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.76■■□□□ 1.07
Hoxa9P09631 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hoxa9P09631 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hoxa9P09631 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Hoxa9P09631 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hoxa9P09631 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Hoxa9P09631 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hoxa9P09631 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hoxa9P09631 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.75■■□□□ 1.07
Hoxa9P09631 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Hoxa9P09631 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Hoxa9P09631 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hoxa9P09631 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hoxa9P09631 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.74■■□□□ 1.07
Hoxa9P09631 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hoxa9P09631 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Hoxa9P09631 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hoxa9P09631 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Hoxa9P09631 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.73■■□□□ 1.07
Hoxa9P09631 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hoxa9P09631 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.73■■□□□ 1.07
Hoxa9P09631 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hoxa9P09631 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hoxa9P09631 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.73■■□□□ 1.07
Hoxa9P09631 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Hoxa9P09631 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Hoxa9P09631 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Hoxa9P09631 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hoxa9P09631 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hoxa9P09631 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hoxa9P09631 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.72■■□□□ 1.07
Hoxa9P09631 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.72■■□□□ 1.07
Hoxa9P09631 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.72■■□□□ 1.07
Hoxa9P09631 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Hoxa9P09631 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Hoxa9P09631 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.71■■□□□ 1.07
Hoxa9P09631 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.71■■□□□ 1.07
Hoxa9P09631 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.71■■□□□ 1.07
Hoxa9P09631 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Hoxa9P09631 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Hoxa9P09631 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Hoxa9P09631 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Hoxa9P09631 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hoxa9P09631 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.7■■□□□ 1.06
Hoxa9P09631 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Hoxa9P09631 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Hoxa9P09631 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.7■■□□□ 1.06
Hoxa9P09631 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hoxa9P09631 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hoxa9P09631 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
Hoxa9P09631 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hoxa9P09631 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.69■■□□□ 1.06
Hoxa9P09631 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hoxa9P09631 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hoxa9P09631 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.69■■□□□ 1.06
Hoxa9P09631 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hoxa9P09631 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Hoxa9P09631 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.68■■□□□ 1.06
Hoxa9P09631 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hoxa9P09631 Gm40881-201ENSMUST00000223397 166 ntBASIC21.68■■□□□ 1.06
Hoxa9P09631 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hoxa9P09631 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.68■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms