Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm5812-201ENSMUST00000061073 957 ntBASIC19.3■□□□□ 0.68
P06344 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P06344 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.3■□□□□ 0.68
P06344 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P06344 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P06344 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
P06344 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P06344 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
P06344 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
P06344 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P06344 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
P06344 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P06344 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.28■□□□□ 0.68
P06344 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
P06344 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.28■□□□□ 0.68
P06344 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
P06344 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
P06344 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.27■□□□□ 0.68
P06344 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
P06344 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P06344 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.27■□□□□ 0.68
P06344 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P06344 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
P06344 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P06344 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P06344 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
P06344 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
P06344 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
P06344 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P06344 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
P06344 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P06344 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P06344 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P06344 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
P06344 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.25■□□□□ 0.67
P06344 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
P06344 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P06344 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.25■□□□□ 0.67
P06344 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.25■□□□□ 0.67
P06344 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.25■□□□□ 0.67
P06344 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
P06344 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
P06344 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
P06344 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P06344 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.24■□□□□ 0.67
P06344 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P06344 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
P06344 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P06344 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P06344 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.24■□□□□ 0.67
P06344 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P06344 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
P06344 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
P06344 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
P06344 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
P06344 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.23■□□□□ 0.67
P06344 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.22■□□□□ 0.67
P06344 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
P06344 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P06344 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P06344 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
P06344 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
P06344 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
P06344 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.21■□□□□ 0.67
P06344 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
P06344 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
P06344 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
P06344 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.66
P06344 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.2■□□□□ 0.66
P06344 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
P06344 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
P06344 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
P06344 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
P06344 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.2■□□□□ 0.66
P06344 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
P06344 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
P06344 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
P06344 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
P06344 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
P06344 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
P06344 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
P06344 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.19■□□□□ 0.66
P06344 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
P06344 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
P06344 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
P06344 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
P06344 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.18■□□□□ 0.66
P06344 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.18■□□□□ 0.66
P06344 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
P06344 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
P06344 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
P06344 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
P06344 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
P06344 Gm15546-201ENSMUST00000122095 826 ntBASIC19.17■□□□□ 0.66
P06344 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.17■□□□□ 0.66
P06344 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.17■□□□□ 0.66
P06344 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.17■□□□□ 0.66
P06344 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
P06344 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
P06344 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms