Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
P04940 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
P04940 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
P04940 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
P04940 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
P04940 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
P04940 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.63■□□□□ 0.41
P04940 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
P04940 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
P04940 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
P04940 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
P04940 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
P04940 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
P04940 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
P04940 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.61■□□□□ 0.41
P04940 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
P04940 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
P04940 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.61■□□□□ 0.41
P04940 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
P04940 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
P04940 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
P04940 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
P04940 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
P04940 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
P04940 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
P04940 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
P04940 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
P04940 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.6■□□□□ 0.41
P04940 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
P04940 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
P04940 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.6■□□□□ 0.41
P04940 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
P04940 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
P04940 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
P04940 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
P04940 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.59■□□□□ 0.41
P04940 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.59■□□□□ 0.41
P04940 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
P04940 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.59■□□□□ 0.41
P04940 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.59■□□□□ 0.41
P04940 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
P04940 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.59■□□□□ 0.41
P04940 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
P04940 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
P04940 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.58■□□□□ 0.41
P04940 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
P04940 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
P04940 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
P04940 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
P04940 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.58■□□□□ 0.4
P04940 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.58■□□□□ 0.4
P04940 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
P04940 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
P04940 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P04940 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
P04940 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P04940 Gm10420-201ENSMUST00000121713 882 ntBASIC17.57■□□□□ 0.4
P04940 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.57■□□□□ 0.4
P04940 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.57■□□□□ 0.4
P04940 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P04940 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P04940 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
P04940 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P04940 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
P04940 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
P04940 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
P04940 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
P04940 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
P04940 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.54■□□□□ 0.4
P04940 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
P04940 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
P04940 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
P04940 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
P04940 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
P04940 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
P04940 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.54■□□□□ 0.4
P04940 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.54■□□□□ 0.4
P04940 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
P04940 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
P04940 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P04940 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
P04940 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
P04940 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P04940 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.53■□□□□ 0.4
P04940 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
P04940 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P04940 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P04940 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
P04940 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.53■□□□□ 0.4
P04940 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
P04940 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
P04940 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
P04940 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
P04940 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.52■□□□□ 0.4
P04940 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
P04940 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
P04940 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.52■□□□□ 0.4
P04940 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
P04940 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
P04940 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms