Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
IghmP01872 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
IghmP01872 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
IghmP01872 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
IghmP01872 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
IghmP01872 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.35■□□□□ 0.85
IghmP01872 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IghmP01872 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IghmP01872 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
IghmP01872 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
IghmP01872 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.34■□□□□ 0.85
IghmP01872 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.34■□□□□ 0.85
IghmP01872 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
IghmP01872 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
IghmP01872 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
IghmP01872 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
IghmP01872 Gm11687-201ENSMUST00000118911 886 ntBASIC20.33■□□□□ 0.85
IghmP01872 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
IghmP01872 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
IghmP01872 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
IghmP01872 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
IghmP01872 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
IghmP01872 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
IghmP01872 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
IghmP01872 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
IghmP01872 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
IghmP01872 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.31■□□□□ 0.84
IghmP01872 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
IghmP01872 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
IghmP01872 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
IghmP01872 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
IghmP01872 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
IghmP01872 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
IghmP01872 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
IghmP01872 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
IghmP01872 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.29■□□□□ 0.84
IghmP01872 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.29■□□□□ 0.84
IghmP01872 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
IghmP01872 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
IghmP01872 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
IghmP01872 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
IghmP01872 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
IghmP01872 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.28■□□□□ 0.84
IghmP01872 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
IghmP01872 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IghmP01872 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.28■□□□□ 0.84
IghmP01872 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
IghmP01872 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
IghmP01872 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IghmP01872 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
IghmP01872 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IghmP01872 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.27■□□□□ 0.84
IghmP01872 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IghmP01872 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
IghmP01872 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IghmP01872 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.27■□□□□ 0.84
IghmP01872 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
IghmP01872 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
IghmP01872 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
IghmP01872 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IghmP01872 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
IghmP01872 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IghmP01872 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IghmP01872 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
IghmP01872 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
IghmP01872 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IghmP01872 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
IghmP01872 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
IghmP01872 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.24■□□□□ 0.83
IghmP01872 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IghmP01872 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
IghmP01872 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IghmP01872 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IghmP01872 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
IghmP01872 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
IghmP01872 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.23■□□□□ 0.83
IghmP01872 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
IghmP01872 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.22■□□□□ 0.83
IghmP01872 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
IghmP01872 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.22■□□□□ 0.83
IghmP01872 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
IghmP01872 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IghmP01872 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IghmP01872 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
IghmP01872 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IghmP01872 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
IghmP01872 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
IghmP01872 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IghmP01872 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
IghmP01872 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.2■□□□□ 0.82
IghmP01872 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
IghmP01872 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
IghmP01872 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
IghmP01872 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IghmP01872 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
IghmP01872 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
IghmP01872 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
IghmP01872 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
IghmP01872 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
IghmP01872 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms