Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Abcd4O89016 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Abcd4O89016 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Abcd4O89016 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Abcd4O89016 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Abcd4O89016 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Abcd4O89016 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Abcd4O89016 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Abcd4O89016 Gm22567-201ENSMUST00000175542 342 ntBASIC19.44■□□□□ 0.7
Abcd4O89016 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Abcd4O89016 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Abcd4O89016 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Abcd4O89016 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Abcd4O89016 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Abcd4O89016 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Abcd4O89016 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Abcd4O89016 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Abcd4O89016 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Abcd4O89016 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Abcd4O89016 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Abcd4O89016 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Abcd4O89016 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.42■□□□□ 0.7
Abcd4O89016 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.42■□□□□ 0.7
Abcd4O89016 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Abcd4O89016 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Abcd4O89016 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Abcd4O89016 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Abcd4O89016 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Abcd4O89016 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Abcd4O89016 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Abcd4O89016 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.41■□□□□ 0.7
Abcd4O89016 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Abcd4O89016 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Abcd4O89016 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Abcd4O89016 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Abcd4O89016 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Abcd4O89016 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Abcd4O89016 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Abcd4O89016 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Abcd4O89016 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Abcd4O89016 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Abcd4O89016 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Abcd4O89016 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Abcd4O89016 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Abcd4O89016 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
Abcd4O89016 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Abcd4O89016 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Abcd4O89016 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.39■□□□□ 0.69
Abcd4O89016 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Abcd4O89016 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Abcd4O89016 Rps24-207ENSMUST00000224568 714 ntBASIC19.38■□□□□ 0.69
Abcd4O89016 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Abcd4O89016 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Abcd4O89016 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Abcd4O89016 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Abcd4O89016 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Abcd4O89016 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Abcd4O89016 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.37■□□□□ 0.69
Abcd4O89016 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Abcd4O89016 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Abcd4O89016 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.37■□□□□ 0.69
Abcd4O89016 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Abcd4O89016 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Abcd4O89016 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Abcd4O89016 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Abcd4O89016 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Abcd4O89016 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Abcd4O89016 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Abcd4O89016 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Abcd4O89016 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Abcd4O89016 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Abcd4O89016 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Abcd4O89016 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Abcd4O89016 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Abcd4O89016 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.35■□□□□ 0.69
Abcd4O89016 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Abcd4O89016 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Abcd4O89016 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Abcd4O89016 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Abcd4O89016 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Abcd4O89016 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Abcd4O89016 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Abcd4O89016 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Abcd4O89016 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Abcd4O89016 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Abcd4O89016 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.34■□□□□ 0.69
Abcd4O89016 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.34■□□□□ 0.69
Abcd4O89016 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Abcd4O89016 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Abcd4O89016 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Abcd4O89016 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Abcd4O89016 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Abcd4O89016 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
Abcd4O89016 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Abcd4O89016 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Abcd4O89016 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Abcd4O89016 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
Abcd4O89016 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Abcd4O89016 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Abcd4O89016 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms