Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Hcn3O88705 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Hcn3O88705 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.62■□□□□ 0.89
Hcn3O88705 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hcn3O88705 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hcn3O88705 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hcn3O88705 Gm22567-201ENSMUST00000175542 342 ntBASIC20.61■□□□□ 0.89
Hcn3O88705 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hcn3O88705 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.61■□□□□ 0.89
Hcn3O88705 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hcn3O88705 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.61■□□□□ 0.89
Hcn3O88705 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hcn3O88705 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hcn3O88705 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
Hcn3O88705 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hcn3O88705 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hcn3O88705 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hcn3O88705 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.59■□□□□ 0.89
Hcn3O88705 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.59■□□□□ 0.89
Hcn3O88705 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Hcn3O88705 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Hcn3O88705 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hcn3O88705 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
Hcn3O88705 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hcn3O88705 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hcn3O88705 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hcn3O88705 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hcn3O88705 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hcn3O88705 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Hcn3O88705 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hcn3O88705 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hcn3O88705 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hcn3O88705 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hcn3O88705 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Hcn3O88705 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Hcn3O88705 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hcn3O88705 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Hcn3O88705 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Hcn3O88705 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hcn3O88705 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Hcn3O88705 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hcn3O88705 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hcn3O88705 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Hcn3O88705 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hcn3O88705 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Hcn3O88705 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hcn3O88705 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hcn3O88705 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Hcn3O88705 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hcn3O88705 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Hcn3O88705 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hcn3O88705 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hcn3O88705 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.54■□□□□ 0.88
Hcn3O88705 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hcn3O88705 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hcn3O88705 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hcn3O88705 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hcn3O88705 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hcn3O88705 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hcn3O88705 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Hcn3O88705 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.53■□□□□ 0.88
Hcn3O88705 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hcn3O88705 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hcn3O88705 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Hcn3O88705 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hcn3O88705 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Hcn3O88705 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hcn3O88705 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Hcn3O88705 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Hcn3O88705 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hcn3O88705 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hcn3O88705 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Hcn3O88705 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
Hcn3O88705 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
Hcn3O88705 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Hcn3O88705 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hcn3O88705 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hcn3O88705 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hcn3O88705 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hcn3O88705 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Hcn3O88705 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hcn3O88705 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hcn3O88705 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hcn3O88705 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hcn3O88705 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.49■□□□□ 0.87
Hcn3O88705 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.49■□□□□ 0.87
Hcn3O88705 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hcn3O88705 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hcn3O88705 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hcn3O88705 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hcn3O88705 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hcn3O88705 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hcn3O88705 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Hcn3O88705 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.47■□□□□ 0.87
Hcn3O88705 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Hcn3O88705 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hcn3O88705 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hcn3O88705 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hcn3O88705 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hcn3O88705 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms