Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
ClppO88696 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.95■□□□□ 0.94
ClppO88696 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ClppO88696 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ClppO88696 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ClppO88696 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ClppO88696 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
ClppO88696 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ClppO88696 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
ClppO88696 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ClppO88696 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
ClppO88696 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ClppO88696 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
ClppO88696 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.93■□□□□ 0.94
ClppO88696 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ClppO88696 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
ClppO88696 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ClppO88696 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ClppO88696 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.92■□□□□ 0.94
ClppO88696 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.92■□□□□ 0.94
ClppO88696 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ClppO88696 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ClppO88696 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
ClppO88696 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ClppO88696 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
ClppO88696 Gm22567-201ENSMUST00000175542 342 ntBASIC20.91■□□□□ 0.94
ClppO88696 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.91■□□□□ 0.94
ClppO88696 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ClppO88696 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ClppO88696 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ClppO88696 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ClppO88696 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ClppO88696 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ClppO88696 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.9■□□□□ 0.94
ClppO88696 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ClppO88696 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
ClppO88696 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ClppO88696 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.9■□□□□ 0.94
ClppO88696 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
ClppO88696 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.9■□□□□ 0.94
ClppO88696 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ClppO88696 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ClppO88696 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
ClppO88696 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ClppO88696 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ClppO88696 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.89■□□□□ 0.93
ClppO88696 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ClppO88696 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.89■□□□□ 0.93
ClppO88696 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
ClppO88696 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
ClppO88696 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ClppO88696 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
ClppO88696 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ClppO88696 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ClppO88696 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ClppO88696 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ClppO88696 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ClppO88696 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ClppO88696 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.87■□□□□ 0.93
ClppO88696 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ClppO88696 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
ClppO88696 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ClppO88696 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ClppO88696 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ClppO88696 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ClppO88696 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
ClppO88696 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ClppO88696 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ClppO88696 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
ClppO88696 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.86■□□□□ 0.93
ClppO88696 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
ClppO88696 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ClppO88696 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ClppO88696 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ClppO88696 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
ClppO88696 Gm15820-201ENSMUST00000201566 728 ntBASIC20.85■□□□□ 0.93
ClppO88696 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ClppO88696 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ClppO88696 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ClppO88696 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
ClppO88696 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ClppO88696 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ClppO88696 Rps24-207ENSMUST00000224568 714 ntBASIC20.84■□□□□ 0.93
ClppO88696 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ClppO88696 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ClppO88696 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ClppO88696 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ClppO88696 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ClppO88696 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ClppO88696 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.83■□□□□ 0.93
ClppO88696 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ClppO88696 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.83■□□□□ 0.93
ClppO88696 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ClppO88696 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
ClppO88696 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ClppO88696 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
ClppO88696 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ClppO88696 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
ClppO88696 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
ClppO88696 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms