Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lmx1bO88609 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lmx1bO88609 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Lmx1bO88609 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Lmx1bO88609 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lmx1bO88609 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lmx1bO88609 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Lmx1bO88609 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lmx1bO88609 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lmx1bO88609 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.53■□□□□ 0.72
Lmx1bO88609 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Lmx1bO88609 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Lmx1bO88609 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lmx1bO88609 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lmx1bO88609 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Lmx1bO88609 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Lmx1bO88609 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.53■□□□□ 0.72
Lmx1bO88609 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lmx1bO88609 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lmx1bO88609 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Lmx1bO88609 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lmx1bO88609 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lmx1bO88609 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lmx1bO88609 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lmx1bO88609 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Lmx1bO88609 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
Lmx1bO88609 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lmx1bO88609 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Lmx1bO88609 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Lmx1bO88609 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.52■□□□□ 0.71
Lmx1bO88609 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lmx1bO88609 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lmx1bO88609 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lmx1bO88609 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Lmx1bO88609 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.51■□□□□ 0.71
Lmx1bO88609 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lmx1bO88609 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Lmx1bO88609 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lmx1bO88609 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.5■□□□□ 0.71
Lmx1bO88609 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Lmx1bO88609 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Lmx1bO88609 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Lmx1bO88609 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lmx1bO88609 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Lmx1bO88609 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lmx1bO88609 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lmx1bO88609 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lmx1bO88609 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lmx1bO88609 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lmx1bO88609 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lmx1bO88609 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Lmx1bO88609 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lmx1bO88609 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lmx1bO88609 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.48■□□□□ 0.71
Lmx1bO88609 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lmx1bO88609 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Lmx1bO88609 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Lmx1bO88609 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lmx1bO88609 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lmx1bO88609 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.47■□□□□ 0.71
Lmx1bO88609 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lmx1bO88609 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lmx1bO88609 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Lmx1bO88609 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Lmx1bO88609 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lmx1bO88609 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lmx1bO88609 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lmx1bO88609 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Lmx1bO88609 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lmx1bO88609 Rps24-207ENSMUST00000224568 714 ntBASIC19.46■□□□□ 0.71
Lmx1bO88609 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Lmx1bO88609 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Lmx1bO88609 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lmx1bO88609 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lmx1bO88609 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lmx1bO88609 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Lmx1bO88609 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.45■□□□□ 0.7
Lmx1bO88609 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lmx1bO88609 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lmx1bO88609 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lmx1bO88609 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Lmx1bO88609 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lmx1bO88609 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.44■□□□□ 0.7
Lmx1bO88609 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.44■□□□□ 0.7
Lmx1bO88609 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lmx1bO88609 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lmx1bO88609 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lmx1bO88609 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lmx1bO88609 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lmx1bO88609 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lmx1bO88609 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Lmx1bO88609 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lmx1bO88609 Gm14117-201ENSMUST00000122417 843 ntBASIC19.43■□□□□ 0.7
Lmx1bO88609 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lmx1bO88609 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.43■□□□□ 0.7
Lmx1bO88609 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lmx1bO88609 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lmx1bO88609 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Lmx1bO88609 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lmx1bO88609 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms