Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tulp3O88413 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tulp3O88413 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tulp3O88413 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tulp3O88413 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.14■□□□□ 0.81
Tulp3O88413 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tulp3O88413 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.14■□□□□ 0.81
Tulp3O88413 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tulp3O88413 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tulp3O88413 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tulp3O88413 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
Tulp3O88413 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tulp3O88413 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tulp3O88413 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Tulp3O88413 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tulp3O88413 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tulp3O88413 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tulp3O88413 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Tulp3O88413 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.12■□□□□ 0.81
Tulp3O88413 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tulp3O88413 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Tulp3O88413 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tulp3O88413 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.11■□□□□ 0.81
Tulp3O88413 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Tulp3O88413 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.11■□□□□ 0.81
Tulp3O88413 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.11■□□□□ 0.81
Tulp3O88413 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Tulp3O88413 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tulp3O88413 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tulp3O88413 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tulp3O88413 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tulp3O88413 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tulp3O88413 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tulp3O88413 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Tulp3O88413 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tulp3O88413 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Tulp3O88413 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tulp3O88413 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Tulp3O88413 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tulp3O88413 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Tulp3O88413 Gm8503-201ENSMUST00000118131 455 ntBASIC20.09■□□□□ 0.81
Tulp3O88413 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tulp3O88413 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tulp3O88413 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tulp3O88413 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tulp3O88413 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.08■□□□□ 0.81
Tulp3O88413 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.08■□□□□ 0.81
Tulp3O88413 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.08■□□□□ 0.81
Tulp3O88413 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Tulp3O88413 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Tulp3O88413 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Tulp3O88413 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tulp3O88413 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Tulp3O88413 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Tulp3O88413 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tulp3O88413 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tulp3O88413 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Tulp3O88413 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Tulp3O88413 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tulp3O88413 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.07■□□□□ 0.8
Tulp3O88413 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tulp3O88413 Gm45364-201ENSMUST00000210883 159 ntBASIC20.06■□□□□ 0.8
Tulp3O88413 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.06■□□□□ 0.8
Tulp3O88413 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tulp3O88413 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tulp3O88413 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.05■□□□□ 0.8
Tulp3O88413 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Tulp3O88413 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Tulp3O88413 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.05■□□□□ 0.8
Tulp3O88413 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
Tulp3O88413 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tulp3O88413 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tulp3O88413 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Tulp3O88413 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tulp3O88413 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Tulp3O88413 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
Tulp3O88413 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tulp3O88413 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tulp3O88413 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.04■□□□□ 0.8
Tulp3O88413 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tulp3O88413 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tulp3O88413 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.03■□□□□ 0.8
Tulp3O88413 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tulp3O88413 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Tulp3O88413 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tulp3O88413 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tulp3O88413 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tulp3O88413 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tulp3O88413 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Tulp3O88413 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tulp3O88413 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tulp3O88413 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Tulp3O88413 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Tulp3O88413 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Tulp3O88413 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Tulp3O88413 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tulp3O88413 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Tulp3O88413 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Tulp3O88413 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tulp3O88413 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms