Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cdh16O88338 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdh16O88338 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdh16O88338 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Cdh16O88338 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Cdh16O88338 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cdh16O88338 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
Cdh16O88338 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdh16O88338 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.06■□□□□ 0.96
Cdh16O88338 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdh16O88338 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cdh16O88338 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdh16O88338 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdh16O88338 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdh16O88338 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdh16O88338 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.05■□□□□ 0.96
Cdh16O88338 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdh16O88338 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdh16O88338 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdh16O88338 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdh16O88338 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdh16O88338 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.04■□□□□ 0.96
Cdh16O88338 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdh16O88338 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.04■□□□□ 0.96
Cdh16O88338 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdh16O88338 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdh16O88338 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.04■□□□□ 0.96
Cdh16O88338 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.04■□□□□ 0.96
Cdh16O88338 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdh16O88338 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdh16O88338 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cdh16O88338 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cdh16O88338 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cdh16O88338 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.02■□□□□ 0.96
Cdh16O88338 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cdh16O88338 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cdh16O88338 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cdh16O88338 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.02■□□□□ 0.95
Cdh16O88338 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
Cdh16O88338 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdh16O88338 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdh16O88338 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdh16O88338 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdh16O88338 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdh16O88338 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdh16O88338 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cdh16O88338 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdh16O88338 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdh16O88338 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdh16O88338 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Cdh16O88338 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cdh16O88338 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21■□□□□ 0.95
Cdh16O88338 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cdh16O88338 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
Cdh16O88338 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Cdh16O88338 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21■□□□□ 0.95
Cdh16O88338 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cdh16O88338 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cdh16O88338 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdh16O88338 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cdh16O88338 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.99■□□□□ 0.95
Cdh16O88338 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.99■□□□□ 0.95
Cdh16O88338 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdh16O88338 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Cdh16O88338 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cdh16O88338 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Cdh16O88338 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cdh16O88338 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.98■□□□□ 0.95
Cdh16O88338 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.98■□□□□ 0.95
Cdh16O88338 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Cdh16O88338 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cdh16O88338 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.98■□□□□ 0.95
Cdh16O88338 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.97■□□□□ 0.95
Cdh16O88338 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdh16O88338 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdh16O88338 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdh16O88338 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdh16O88338 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdh16O88338 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdh16O88338 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
Cdh16O88338 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cdh16O88338 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cdh16O88338 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdh16O88338 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdh16O88338 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cdh16O88338 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdh16O88338 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdh16O88338 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdh16O88338 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdh16O88338 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdh16O88338 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Cdh16O88338 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdh16O88338 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdh16O88338 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdh16O88338 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdh16O88338 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cdh16O88338 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdh16O88338 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdh16O88338 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdh16O88338 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms