Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Cntnap1O54991 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Cntnap1O54991 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC29.19■■■□□ 2.26
Cntnap1O54991 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC29.18■■■□□ 2.26
Cntnap1O54991 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC29.18■■■□□ 2.26
Cntnap1O54991 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC29.18■■■□□ 2.26
Cntnap1O54991 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
Cntnap1O54991 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Cntnap1O54991 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Cntnap1O54991 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Cntnap1O54991 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC29.17■■■□□ 2.26
Cntnap1O54991 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
Cntnap1O54991 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC29.16■■■□□ 2.26
Cntnap1O54991 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
Cntnap1O54991 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Cntnap1O54991 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Cntnap1O54991 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC29.16■■■□□ 2.26
Cntnap1O54991 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC29.15■■■□□ 2.26
Cntnap1O54991 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC29.15■■■□□ 2.26
Cntnap1O54991 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Cntnap1O54991 Gm43017-201ENSMUST00000198296 752 ntBASIC29.14■■■□□ 2.26
Cntnap1O54991 Gm9207-201ENSMUST00000198773 1115 ntBASIC29.14■■■□□ 2.26
Cntnap1O54991 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC29.14■■■□□ 2.26
Cntnap1O54991 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC29.13■■■□□ 2.25
Cntnap1O54991 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC29.13■■■□□ 2.25
Cntnap1O54991 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Cntnap1O54991 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Cntnap1O54991 AC164433.2-201ENSMUST00000226346 1701 ntBASIC29.13■■■□□ 2.25
Cntnap1O54991 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC29.13■■■□□ 2.25
Cntnap1O54991 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Cntnap1O54991 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC29.11■■■□□ 2.25
Cntnap1O54991 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC29.11■■■□□ 2.25
Cntnap1O54991 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Cntnap1O54991 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Cntnap1O54991 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Cntnap1O54991 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC29.1■■■□□ 2.25
Cntnap1O54991 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC29.1■■■□□ 2.25
Cntnap1O54991 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Cntnap1O54991 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Cntnap1O54991 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
Cntnap1O54991 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC29.08■■■□□ 2.25
Cntnap1O54991 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC29.08■■■□□ 2.25
Cntnap1O54991 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
Cntnap1O54991 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Cntnap1O54991 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
Cntnap1O54991 Gm11847-201ENSMUST00000125165 1119 ntBASIC29.07■■■□□ 2.24
Cntnap1O54991 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC29.07■■■□□ 2.24
Cntnap1O54991 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC29.07■■■□□ 2.24
Cntnap1O54991 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC29.06■■■□□ 2.24
Cntnap1O54991 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
Cntnap1O54991 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
Cntnap1O54991 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC29.06■■■□□ 2.24
Cntnap1O54991 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Cntnap1O54991 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC29.05■■■□□ 2.24
Cntnap1O54991 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Cntnap1O54991 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Cntnap1O54991 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC29.05■■■□□ 2.24
Cntnap1O54991 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC29.05■■■□□ 2.24
Cntnap1O54991 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Cntnap1O54991 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC29.04■■■□□ 2.24
Cntnap1O54991 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
Cntnap1O54991 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
Cntnap1O54991 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Cntnap1O54991 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
Cntnap1O54991 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Cntnap1O54991 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Cntnap1O54991 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Cntnap1O54991 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Cntnap1O54991 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
Cntnap1O54991 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC29.02■■■□□ 2.24
Cntnap1O54991 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Cntnap1O54991 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC29.02■■■□□ 2.24
Cntnap1O54991 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Cntnap1O54991 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC29.01■■■□□ 2.24
Cntnap1O54991 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
Cntnap1O54991 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC29.01■■■□□ 2.24
Cntnap1O54991 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Cntnap1O54991 CT025689.6-201ENSMUST00000224991 1104 ntBASIC29.01■■■□□ 2.23
Cntnap1O54991 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Cntnap1O54991 Gm26571-201ENSMUST00000181399 666 ntBASIC29■■■□□ 2.23
Cntnap1O54991 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Cntnap1O54991 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Cntnap1O54991 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC28.99■■■□□ 2.23
Cntnap1O54991 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC28.99■■■□□ 2.23
Cntnap1O54991 Nsd1-206ENSMUST00000224918 1001 ntBASIC28.99■■■□□ 2.23
Cntnap1O54991 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
Cntnap1O54991 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Cntnap1O54991 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Cntnap1O54991 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC28.98■■■□□ 2.23
Cntnap1O54991 Gm8093-201ENSMUST00000128935 1892 ntBASIC28.98■■■□□ 2.23
Cntnap1O54991 Gm27405-201ENSMUST00000184201 112 ntBASIC28.98■■■□□ 2.23
Cntnap1O54991 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC28.98■■■□□ 2.23
Cntnap1O54991 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.97■■■□□ 2.23
Cntnap1O54991 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC28.96■■■□□ 2.23
Cntnap1O54991 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Cntnap1O54991 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Cntnap1O54991 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Cntnap1O54991 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Cntnap1O54991 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
Cntnap1O54991 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC28.95■■■□□ 2.23
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms