Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
Nr1i3O35627 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Nr1i3O35627 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Nr1i3O35627 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC23.33■■□□□ 1.32
Nr1i3O35627 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC23.32■■□□□ 1.32
Nr1i3O35627 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Nr1i3O35627 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Nr1i3O35627 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Nr1i3O35627 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Nr1i3O35627 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC23.31■■□□□ 1.32
Nr1i3O35627 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Nr1i3O35627 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Nr1i3O35627 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Nr1i3O35627 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Nr1i3O35627 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
Nr1i3O35627 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Nr1i3O35627 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC23.3■■□□□ 1.32
Nr1i3O35627 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Nr1i3O35627 Gm37415-201ENSMUST00000192265 2054 ntBASIC23.29■■□□□ 1.32
Nr1i3O35627 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Nr1i3O35627 Gm11687-201ENSMUST00000118911 886 ntBASIC23.28■■□□□ 1.32
Nr1i3O35627 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Nr1i3O35627 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Nr1i3O35627 Gm32051-202ENSMUST00000197905 2385 ntBASIC23.28■■□□□ 1.32
Nr1i3O35627 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Nr1i3O35627 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Nr1i3O35627 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC23.28■■□□□ 1.32
Nr1i3O35627 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Nr1i3O35627 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Nr1i3O35627 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Nr1i3O35627 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Nr1i3O35627 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Nr1i3O35627 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.27■■□□□ 1.32
Nr1i3O35627 AC151971.4-201ENSMUST00000214717 704 ntBASIC23.27■■□□□ 1.32
Nr1i3O35627 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Nr1i3O35627 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Nr1i3O35627 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Nr1i3O35627 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Nr1i3O35627 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC23.27■■□□□ 1.32
Nr1i3O35627 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Nr1i3O35627 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Nr1i3O35627 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Nr1i3O35627 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC23.26■■□□□ 1.31
Nr1i3O35627 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC23.25■■□□□ 1.31
Nr1i3O35627 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Nr1i3O35627 Gm42418-201ENSMUST00000182010 1831 ntBASIC23.25■■□□□ 1.31
Nr1i3O35627 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
Nr1i3O35627 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Nr1i3O35627 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
Nr1i3O35627 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC23.24■■□□□ 1.31
Nr1i3O35627 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Nr1i3O35627 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC23.24■■□□□ 1.31
Nr1i3O35627 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC23.23■■□□□ 1.31
Nr1i3O35627 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Nr1i3O35627 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Nr1i3O35627 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Nr1i3O35627 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC23.22■■□□□ 1.31
Nr1i3O35627 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Nr1i3O35627 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Nr1i3O35627 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC23.22■■□□□ 1.31
Nr1i3O35627 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC23.22■■□□□ 1.31
Nr1i3O35627 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Nr1i3O35627 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC23.22■■□□□ 1.31
Nr1i3O35627 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC23.22■■□□□ 1.31
Nr1i3O35627 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC23.22■■□□□ 1.31
Nr1i3O35627 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Nr1i3O35627 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC23.21■■□□□ 1.31
Nr1i3O35627 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Nr1i3O35627 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Nr1i3O35627 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Nr1i3O35627 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Nr1i3O35627 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Nr1i3O35627 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC23.2■■□□□ 1.3
Nr1i3O35627 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Nr1i3O35627 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Nr1i3O35627 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Nr1i3O35627 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Nr1i3O35627 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Nr1i3O35627 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Nr1i3O35627 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Nr1i3O35627 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Nr1i3O35627 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Nr1i3O35627 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Nr1i3O35627 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Nr1i3O35627 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
Nr1i3O35627 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Nr1i3O35627 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Nr1i3O35627 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Nr1i3O35627 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Nr1i3O35627 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Nr1i3O35627 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Nr1i3O35627 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC23.17■■□□□ 1.3
Nr1i3O35627 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Nr1i3O35627 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Nr1i3O35627 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Nr1i3O35627 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Nr1i3O35627 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Nr1i3O35627 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Nr1i3O35627 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Nr1i3O35627 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms