Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
Col15a1O35206 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Col15a1O35206 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Col15a1O35206 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Col15a1O35206 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
Col15a1O35206 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Col15a1O35206 Gm8093-201ENSMUST00000128935 1892 ntBASIC28.39■■■□□ 2.13
Col15a1O35206 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
Col15a1O35206 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Col15a1O35206 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC28.38■■■□□ 2.13
Col15a1O35206 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Col15a1O35206 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Col15a1O35206 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC28.37■■■□□ 2.13
Col15a1O35206 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Col15a1O35206 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
Col15a1O35206 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Col15a1O35206 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
Col15a1O35206 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Col15a1O35206 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Col15a1O35206 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC28.36■■■□□ 2.13
Col15a1O35206 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
Col15a1O35206 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Col15a1O35206 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC28.36■■■□□ 2.13
Col15a1O35206 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
Col15a1O35206 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Col15a1O35206 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Col15a1O35206 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC28.35■■■□□ 2.13
Col15a1O35206 Gm10399-202ENSMUST00000202768 748 ntBASIC28.35■■■□□ 2.13
Col15a1O35206 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC28.35■■■□□ 2.13
Col15a1O35206 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC28.35■■■□□ 2.13
Col15a1O35206 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Col15a1O35206 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Col15a1O35206 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Col15a1O35206 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Col15a1O35206 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Col15a1O35206 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Col15a1O35206 Gm12922-201ENSMUST00000120626 809 ntBASIC28.34■■■□□ 2.13
Col15a1O35206 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Col15a1O35206 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC28.33■■■□□ 2.13
Col15a1O35206 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Col15a1O35206 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
Col15a1O35206 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC28.33■■■□□ 2.13
Col15a1O35206 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.12
Col15a1O35206 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Col15a1O35206 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC28.32■■■□□ 2.12
Col15a1O35206 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Col15a1O35206 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Col15a1O35206 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Col15a1O35206 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Col15a1O35206 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Col15a1O35206 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Col15a1O35206 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Col15a1O35206 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Col15a1O35206 Gm28731-201ENSMUST00000185564 1569 ntBASIC28.3■■■□□ 2.12
Col15a1O35206 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Col15a1O35206 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC28.29■■■□□ 2.12
Col15a1O35206 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Col15a1O35206 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Col15a1O35206 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Col15a1O35206 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC28.28■■■□□ 2.12
Col15a1O35206 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Col15a1O35206 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Col15a1O35206 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Col15a1O35206 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Col15a1O35206 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC28.27■■■□□ 2.12
Col15a1O35206 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC28.27■■■□□ 2.12
Col15a1O35206 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Col15a1O35206 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC28.27■■■□□ 2.12
Col15a1O35206 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
Col15a1O35206 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Col15a1O35206 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC28.26■■■□□ 2.12
Col15a1O35206 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Col15a1O35206 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC28.26■■■□□ 2.11
Col15a1O35206 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Col15a1O35206 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC28.25■■■□□ 2.11
Col15a1O35206 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
Col15a1O35206 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
Col15a1O35206 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
Col15a1O35206 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Col15a1O35206 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Col15a1O35206 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
Col15a1O35206 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC28.24■■■□□ 2.11
Col15a1O35206 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Col15a1O35206 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
Col15a1O35206 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Col15a1O35206 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Col15a1O35206 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Col15a1O35206 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Col15a1O35206 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Col15a1O35206 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC28.22■■■□□ 2.11
Col15a1O35206 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Col15a1O35206 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Col15a1O35206 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
Col15a1O35206 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
Col15a1O35206 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Col15a1O35206 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Col15a1O35206 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC28.19■■■□□ 2.1
Col15a1O35206 AC140930.3-201ENSMUST00000222935 274 ntBASIC28.19■■■□□ 2.1
Col15a1O35206 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
Col15a1O35206 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms