Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cx3cl1O35188 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cx3cl1O35188 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cx3cl1O35188 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Cx3cl1O35188 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.2■□□□□ 0.82
Cx3cl1O35188 Gm22567-201ENSMUST00000175542 342 ntBASIC20.2■□□□□ 0.82
Cx3cl1O35188 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cx3cl1O35188 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Cx3cl1O35188 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cx3cl1O35188 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cx3cl1O35188 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cx3cl1O35188 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cx3cl1O35188 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Cx3cl1O35188 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cx3cl1O35188 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cx3cl1O35188 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cx3cl1O35188 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cx3cl1O35188 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cx3cl1O35188 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cx3cl1O35188 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cx3cl1O35188 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.18■□□□□ 0.82
Cx3cl1O35188 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Cx3cl1O35188 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.18■□□□□ 0.82
Cx3cl1O35188 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cx3cl1O35188 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Cx3cl1O35188 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cx3cl1O35188 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cx3cl1O35188 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Cx3cl1O35188 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cx3cl1O35188 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.17■□□□□ 0.82
Cx3cl1O35188 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.17■□□□□ 0.82
Cx3cl1O35188 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cx3cl1O35188 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cx3cl1O35188 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cx3cl1O35188 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.17■□□□□ 0.82
Cx3cl1O35188 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cx3cl1O35188 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cx3cl1O35188 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cx3cl1O35188 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cx3cl1O35188 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.16■□□□□ 0.82
Cx3cl1O35188 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.16■□□□□ 0.82
Cx3cl1O35188 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cx3cl1O35188 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cx3cl1O35188 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cx3cl1O35188 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cx3cl1O35188 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cx3cl1O35188 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cx3cl1O35188 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.15■□□□□ 0.82
Cx3cl1O35188 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cx3cl1O35188 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Cx3cl1O35188 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cx3cl1O35188 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cx3cl1O35188 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cx3cl1O35188 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cx3cl1O35188 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.14■□□□□ 0.81
Cx3cl1O35188 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cx3cl1O35188 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.14■□□□□ 0.81
Cx3cl1O35188 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cx3cl1O35188 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.13■□□□□ 0.81
Cx3cl1O35188 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cx3cl1O35188 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cx3cl1O35188 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cx3cl1O35188 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cx3cl1O35188 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.12■□□□□ 0.81
Cx3cl1O35188 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.12■□□□□ 0.81
Cx3cl1O35188 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Cx3cl1O35188 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Cx3cl1O35188 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cx3cl1O35188 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cx3cl1O35188 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cx3cl1O35188 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Cx3cl1O35188 Gm45444-201ENSMUST00000211394 898 ntBASIC20.11■□□□□ 0.81
Cx3cl1O35188 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cx3cl1O35188 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cx3cl1O35188 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Cx3cl1O35188 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cx3cl1O35188 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.1■□□□□ 0.81
Cx3cl1O35188 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
Cx3cl1O35188 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cx3cl1O35188 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.1■□□□□ 0.81
Cx3cl1O35188 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Cx3cl1O35188 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cx3cl1O35188 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cx3cl1O35188 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cx3cl1O35188 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cx3cl1O35188 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cx3cl1O35188 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cx3cl1O35188 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Cx3cl1O35188 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cx3cl1O35188 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cx3cl1O35188 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Cx3cl1O35188 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Cx3cl1O35188 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cx3cl1O35188 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Cx3cl1O35188 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cx3cl1O35188 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Cx3cl1O35188 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cx3cl1O35188 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Cx3cl1O35188 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cx3cl1O35188 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 93.9 ms