Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Tnfrsf11bO08712 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.99■■□□□ 1.11
Tnfrsf11bO08712 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Tnfrsf11bO08712 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Tnfrsf11bO08712 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Tnfrsf11bO08712 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Tnfrsf11bO08712 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Tnfrsf11bO08712 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
Tnfrsf11bO08712 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.98■■□□□ 1.11
Tnfrsf11bO08712 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Tnfrsf11bO08712 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Tnfrsf11bO08712 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Tnfrsf11bO08712 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Tnfrsf11bO08712 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Tnfrsf11bO08712 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Tnfrsf11bO08712 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tnfrsf11bO08712 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tnfrsf11bO08712 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tnfrsf11bO08712 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Tnfrsf11bO08712 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tnfrsf11bO08712 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tnfrsf11bO08712 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Tnfrsf11bO08712 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Tnfrsf11bO08712 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.96■■□□□ 1.11
Tnfrsf11bO08712 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Tnfrsf11bO08712 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Tnfrsf11bO08712 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Tnfrsf11bO08712 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Tnfrsf11bO08712 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Tnfrsf11bO08712 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Tnfrsf11bO08712 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.95■■□□□ 1.1
Tnfrsf11bO08712 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Tnfrsf11bO08712 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Tnfrsf11bO08712 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.95■■□□□ 1.1
Tnfrsf11bO08712 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.95■■□□□ 1.1
Tnfrsf11bO08712 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.95■■□□□ 1.1
Tnfrsf11bO08712 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Tnfrsf11bO08712 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Tnfrsf11bO08712 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Tnfrsf11bO08712 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.94■■□□□ 1.1
Tnfrsf11bO08712 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Tnfrsf11bO08712 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Tnfrsf11bO08712 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Tnfrsf11bO08712 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.94■■□□□ 1.1
Tnfrsf11bO08712 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Tnfrsf11bO08712 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Tnfrsf11bO08712 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Tnfrsf11bO08712 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Tnfrsf11bO08712 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.93■■□□□ 1.1
Tnfrsf11bO08712 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Tnfrsf11bO08712 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Tnfrsf11bO08712 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Tnfrsf11bO08712 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Tnfrsf11bO08712 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Tnfrsf11bO08712 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.92■■□□□ 1.1
Tnfrsf11bO08712 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Tnfrsf11bO08712 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Tnfrsf11bO08712 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
Tnfrsf11bO08712 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Tnfrsf11bO08712 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Tnfrsf11bO08712 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Tnfrsf11bO08712 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Tnfrsf11bO08712 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Tnfrsf11bO08712 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Tnfrsf11bO08712 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
Tnfrsf11bO08712 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Tnfrsf11bO08712 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Tnfrsf11bO08712 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Tnfrsf11bO08712 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Tnfrsf11bO08712 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.89■■□□□ 1.09
Tnfrsf11bO08712 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Tnfrsf11bO08712 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Tnfrsf11bO08712 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Tnfrsf11bO08712 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Tnfrsf11bO08712 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Tnfrsf11bO08712 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.89■■□□□ 1.09
Tnfrsf11bO08712 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.88■■□□□ 1.09
Tnfrsf11bO08712 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Tnfrsf11bO08712 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.88■■□□□ 1.09
Tnfrsf11bO08712 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tnfrsf11bO08712 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.87■■□□□ 1.09
Tnfrsf11bO08712 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tnfrsf11bO08712 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tnfrsf11bO08712 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.86■■□□□ 1.09
Tnfrsf11bO08712 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Tnfrsf11bO08712 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Tnfrsf11bO08712 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
Tnfrsf11bO08712 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Tnfrsf11bO08712 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tnfrsf11bO08712 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tnfrsf11bO08712 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tnfrsf11bO08712 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tnfrsf11bO08712 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tnfrsf11bO08712 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Tnfrsf11bO08712 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Tnfrsf11bO08712 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Tnfrsf11bO08712 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.84■■□□□ 1.09
Tnfrsf11bO08712 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Tnfrsf11bO08712 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Tnfrsf11bO08712 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms