Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Tnfrsf11bO08712 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.99■■□□□ 1.11
Tnfrsf11bO08712 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Tnfrsf11bO08712 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Tnfrsf11bO08712 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Tnfrsf11bO08712 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Tnfrsf11bO08712 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Tnfrsf11bO08712 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
Tnfrsf11bO08712 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.98■■□□□ 1.11
Tnfrsf11bO08712 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Tnfrsf11bO08712 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Tnfrsf11bO08712 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Tnfrsf11bO08712 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Tnfrsf11bO08712 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Tnfrsf11bO08712 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Tnfrsf11bO08712 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tnfrsf11bO08712 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tnfrsf11bO08712 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tnfrsf11bO08712 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Tnfrsf11bO08712 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tnfrsf11bO08712 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tnfrsf11bO08712 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Tnfrsf11bO08712 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Tnfrsf11bO08712 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.96■■□□□ 1.11
Tnfrsf11bO08712 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Tnfrsf11bO08712 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Tnfrsf11bO08712 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Tnfrsf11bO08712 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Tnfrsf11bO08712 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Tnfrsf11bO08712 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Tnfrsf11bO08712 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.95■■□□□ 1.1
Tnfrsf11bO08712 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Tnfrsf11bO08712 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Tnfrsf11bO08712 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.95■■□□□ 1.1
Tnfrsf11bO08712 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.95■■□□□ 1.1
Tnfrsf11bO08712 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.95■■□□□ 1.1
Tnfrsf11bO08712 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Tnfrsf11bO08712 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Tnfrsf11bO08712 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Tnfrsf11bO08712 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.94■■□□□ 1.1
Tnfrsf11bO08712 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Tnfrsf11bO08712 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Tnfrsf11bO08712 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Tnfrsf11bO08712 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.94■■□□□ 1.1
Tnfrsf11bO08712 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Tnfrsf11bO08712 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Tnfrsf11bO08712 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Tnfrsf11bO08712 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Tnfrsf11bO08712 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.93■■□□□ 1.1
Tnfrsf11bO08712 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Tnfrsf11bO08712 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Tnfrsf11bO08712 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Tnfrsf11bO08712 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Tnfrsf11bO08712 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Tnfrsf11bO08712 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.92■■□□□ 1.1
Tnfrsf11bO08712 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Tnfrsf11bO08712 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Tnfrsf11bO08712 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
Tnfrsf11bO08712 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Tnfrsf11bO08712 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Tnfrsf11bO08712 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Tnfrsf11bO08712 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Tnfrsf11bO08712 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Tnfrsf11bO08712 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Tnfrsf11bO08712 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
Tnfrsf11bO08712 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Tnfrsf11bO08712 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Tnfrsf11bO08712 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Tnfrsf11bO08712 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Tnfrsf11bO08712 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.89■■□□□ 1.09
Tnfrsf11bO08712 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Tnfrsf11bO08712 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Tnfrsf11bO08712 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Tnfrsf11bO08712 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Tnfrsf11bO08712 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Tnfrsf11bO08712 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.89■■□□□ 1.09
Tnfrsf11bO08712 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.88■■□□□ 1.09
Tnfrsf11bO08712 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Tnfrsf11bO08712 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.88■■□□□ 1.09
Tnfrsf11bO08712 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tnfrsf11bO08712 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.87■■□□□ 1.09
Tnfrsf11bO08712 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tnfrsf11bO08712 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tnfrsf11bO08712 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.86■■□□□ 1.09
Tnfrsf11bO08712 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Tnfrsf11bO08712 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Tnfrsf11bO08712 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
Tnfrsf11bO08712 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Tnfrsf11bO08712 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tnfrsf11bO08712 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tnfrsf11bO08712 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tnfrsf11bO08712 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tnfrsf11bO08712 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tnfrsf11bO08712 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Tnfrsf11bO08712 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Tnfrsf11bO08712 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Tnfrsf11bO08712 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.84■■□□□ 1.09
Tnfrsf11bO08712 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Tnfrsf11bO08712 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Tnfrsf11bO08712 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 135 ms