Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Dchs1E9PVD3 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.48■□□□□ 0.71
Dchs1E9PVD3 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Dchs1E9PVD3 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.47■□□□□ 0.71
Dchs1E9PVD3 Gm8495-201ENSMUST00000188740 694 ntBASIC19.47■□□□□ 0.71
Dchs1E9PVD3 Golgb1-201ENSMUST00000023534 498 ntBASIC19.47■□□□□ 0.71
Dchs1E9PVD3 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Dchs1E9PVD3 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Dchs1E9PVD3 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Dchs1E9PVD3 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Dchs1E9PVD3 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Dchs1E9PVD3 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Dchs1E9PVD3 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Dchs1E9PVD3 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Dchs1E9PVD3 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.46■□□□□ 0.71
Dchs1E9PVD3 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Dchs1E9PVD3 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.46■□□□□ 0.71
Dchs1E9PVD3 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Dchs1E9PVD3 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.46■□□□□ 0.71
Dchs1E9PVD3 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Dchs1E9PVD3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Dchs1E9PVD3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Dchs1E9PVD3 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Dchs1E9PVD3 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.45■□□□□ 0.7
Dchs1E9PVD3 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Dchs1E9PVD3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Dchs1E9PVD3 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Dchs1E9PVD3 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Dchs1E9PVD3 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Dchs1E9PVD3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Dchs1E9PVD3 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.44■□□□□ 0.7
Dchs1E9PVD3 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Dchs1E9PVD3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Dchs1E9PVD3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Dchs1E9PVD3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Dchs1E9PVD3 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Dchs1E9PVD3 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Dchs1E9PVD3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Dchs1E9PVD3 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Dchs1E9PVD3 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Dchs1E9PVD3 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Dchs1E9PVD3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Dchs1E9PVD3 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Dchs1E9PVD3 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.42■□□□□ 0.7
Dchs1E9PVD3 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.42■□□□□ 0.7
Dchs1E9PVD3 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.42■□□□□ 0.7
Dchs1E9PVD3 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Dchs1E9PVD3 Gm45417-201ENSMUST00000209533 758 ntBASIC19.42■□□□□ 0.7
Dchs1E9PVD3 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Dchs1E9PVD3 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Dchs1E9PVD3 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Dchs1E9PVD3 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
Dchs1E9PVD3 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Dchs1E9PVD3 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Dchs1E9PVD3 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.4■□□□□ 0.7
Dchs1E9PVD3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Dchs1E9PVD3 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Dchs1E9PVD3 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Dchs1E9PVD3 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Dchs1E9PVD3 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Dchs1E9PVD3 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Dchs1E9PVD3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Dchs1E9PVD3 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Dchs1E9PVD3 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Dchs1E9PVD3 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Dchs1E9PVD3 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Dchs1E9PVD3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.39■□□□□ 0.69
Dchs1E9PVD3 Gm18284-201ENSMUST00000172604 624 ntBASIC19.38■□□□□ 0.69
Dchs1E9PVD3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Dchs1E9PVD3 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Dchs1E9PVD3 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Dchs1E9PVD3 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Dchs1E9PVD3 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.38■□□□□ 0.69
Dchs1E9PVD3 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Dchs1E9PVD3 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.37■□□□□ 0.69
Dchs1E9PVD3 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Dchs1E9PVD3 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Dchs1E9PVD3 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Dchs1E9PVD3 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Dchs1E9PVD3 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Dchs1E9PVD3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Dchs1E9PVD3 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Dchs1E9PVD3 Gm40881-201ENSMUST00000223397 166 ntBASIC19.36■□□□□ 0.69
Dchs1E9PVD3 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Dchs1E9PVD3 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Dchs1E9PVD3 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
Dchs1E9PVD3 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Dchs1E9PVD3 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Dchs1E9PVD3 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Dchs1E9PVD3 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Dchs1E9PVD3 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.35■□□□□ 0.69
Dchs1E9PVD3 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.35■□□□□ 0.69
Dchs1E9PVD3 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.35■□□□□ 0.69
Dchs1E9PVD3 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Dchs1E9PVD3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.34■□□□□ 0.69
Dchs1E9PVD3 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Dchs1E9PVD3 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Dchs1E9PVD3 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Dchs1E9PVD3 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Dchs1E9PVD3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms