Protein–RNA interactions for Protein: A2A259

Pkd2l1, Polycystic kidney disease 2-like 1 protein, mousemouse

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd2l1A2A259 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pkd2l1A2A259 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pkd2l1A2A259 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Pkd2l1A2A259 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.98■□□□□ 0.95
Pkd2l1A2A259 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pkd2l1A2A259 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pkd2l1A2A259 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pkd2l1A2A259 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pkd2l1A2A259 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pkd2l1A2A259 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.97■□□□□ 0.95
Pkd2l1A2A259 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.97■□□□□ 0.95
Pkd2l1A2A259 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pkd2l1A2A259 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Pkd2l1A2A259 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Pkd2l1A2A259 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Pkd2l1A2A259 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pkd2l1A2A259 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.96■□□□□ 0.95
Pkd2l1A2A259 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Pkd2l1A2A259 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pkd2l1A2A259 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pkd2l1A2A259 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pkd2l1A2A259 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pkd2l1A2A259 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Pkd2l1A2A259 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.94■□□□□ 0.94
Pkd2l1A2A259 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pkd2l1A2A259 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pkd2l1A2A259 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.94■□□□□ 0.94
Pkd2l1A2A259 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pkd2l1A2A259 Gm15546-201ENSMUST00000122095 826 ntBASIC20.93■□□□□ 0.94
Pkd2l1A2A259 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pkd2l1A2A259 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Pkd2l1A2A259 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Pkd2l1A2A259 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Pkd2l1A2A259 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.92■□□□□ 0.94
Pkd2l1A2A259 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pkd2l1A2A259 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.92■□□□□ 0.94
Pkd2l1A2A259 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Pkd2l1A2A259 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Pkd2l1A2A259 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pkd2l1A2A259 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pkd2l1A2A259 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pkd2l1A2A259 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Pkd2l1A2A259 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pkd2l1A2A259 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Pkd2l1A2A259 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Pkd2l1A2A259 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.91■□□□□ 0.94
Pkd2l1A2A259 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pkd2l1A2A259 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pkd2l1A2A259 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pkd2l1A2A259 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pkd2l1A2A259 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pkd2l1A2A259 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Pkd2l1A2A259 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.9■□□□□ 0.94
Pkd2l1A2A259 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pkd2l1A2A259 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pkd2l1A2A259 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Pkd2l1A2A259 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pkd2l1A2A259 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pkd2l1A2A259 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pkd2l1A2A259 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pkd2l1A2A259 Gm22567-201ENSMUST00000175542 342 ntBASIC20.88■□□□□ 0.93
Pkd2l1A2A259 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.88■□□□□ 0.93
Pkd2l1A2A259 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.88■□□□□ 0.93
Pkd2l1A2A259 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pkd2l1A2A259 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pkd2l1A2A259 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pkd2l1A2A259 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pkd2l1A2A259 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pkd2l1A2A259 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pkd2l1A2A259 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.87■□□□□ 0.93
Pkd2l1A2A259 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pkd2l1A2A259 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pkd2l1A2A259 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pkd2l1A2A259 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Pkd2l1A2A259 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.86■□□□□ 0.93
Pkd2l1A2A259 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pkd2l1A2A259 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.86■□□□□ 0.93
Pkd2l1A2A259 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Pkd2l1A2A259 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.85■□□□□ 0.93
Pkd2l1A2A259 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.85■□□□□ 0.93
Pkd2l1A2A259 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pkd2l1A2A259 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pkd2l1A2A259 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Pkd2l1A2A259 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pkd2l1A2A259 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pkd2l1A2A259 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pkd2l1A2A259 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pkd2l1A2A259 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.84■□□□□ 0.93
Pkd2l1A2A259 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pkd2l1A2A259 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pkd2l1A2A259 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Pkd2l1A2A259 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pkd2l1A2A259 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pkd2l1A2A259 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.83■□□□□ 0.93
Pkd2l1A2A259 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pkd2l1A2A259 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pkd2l1A2A259 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Pkd2l1A2A259 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Pkd2l1A2A259 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pkd2l1A2A259 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms