Protein–RNA interactions for Protein: A0A140T8M6

Igkv3-5, Immunoglobulin kappa chain variable 3-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-5A0A140T8M6 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Igkv3-5A0A140T8M6 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Igkv3-5A0A140T8M6 Mir3960-201ENSMUST00000198213 73 ntBASIC13.59□□□□□ -0.23
Igkv3-5A0A140T8M6 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
Igkv3-5A0A140T8M6 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Igkv3-5A0A140T8M6 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Igkv3-5A0A140T8M6 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC13.59□□□□□ -0.23
Igkv3-5A0A140T8M6 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Igkv3-5A0A140T8M6 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Igkv3-5A0A140T8M6 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Igkv3-5A0A140T8M6 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Igkv3-5A0A140T8M6 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Igkv3-5A0A140T8M6 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Igkv3-5A0A140T8M6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Igkv3-5A0A140T8M6 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Igkv3-5A0A140T8M6 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Igkv3-5A0A140T8M6 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Igkv3-5A0A140T8M6 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Igkv3-5A0A140T8M6 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Igkv3-5A0A140T8M6 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Igkv3-5A0A140T8M6 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC13.57□□□□□ -0.24
Igkv3-5A0A140T8M6 Gm11599-201ENSMUST00000118720 878 ntBASIC13.57□□□□□ -0.24
Igkv3-5A0A140T8M6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC13.57□□□□□ -0.24
Igkv3-5A0A140T8M6 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Igkv3-5A0A140T8M6 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Igkv3-5A0A140T8M6 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC13.57□□□□□ -0.24
Igkv3-5A0A140T8M6 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Igkv3-5A0A140T8M6 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Igkv3-5A0A140T8M6 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Igkv3-5A0A140T8M6 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Igkv3-5A0A140T8M6 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Igkv3-5A0A140T8M6 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Igkv3-5A0A140T8M6 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Igkv3-5A0A140T8M6 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Igkv3-5A0A140T8M6 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Igkv3-5A0A140T8M6 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Igkv3-5A0A140T8M6 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Igkv3-5A0A140T8M6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Igkv3-5A0A140T8M6 AC153911.1-201ENSMUST00000220378 758 ntBASIC13.56□□□□□ -0.24
Igkv3-5A0A140T8M6 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Igkv3-5A0A140T8M6 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Igkv3-5A0A140T8M6 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Igkv3-5A0A140T8M6 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Igkv3-5A0A140T8M6 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Igkv3-5A0A140T8M6 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Igkv3-5A0A140T8M6 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Igkv3-5A0A140T8M6 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Igkv3-5A0A140T8M6 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Igkv3-5A0A140T8M6 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Igkv3-5A0A140T8M6 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Igkv3-5A0A140T8M6 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Igkv3-5A0A140T8M6 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Igkv3-5A0A140T8M6 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Igkv3-5A0A140T8M6 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Igkv3-5A0A140T8M6 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Igkv3-5A0A140T8M6 AC154454.1-201ENSMUST00000225253 216 ntBASIC13.54□□□□□ -0.24
Igkv3-5A0A140T8M6 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Igkv3-5A0A140T8M6 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Igkv3-5A0A140T8M6 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Igkv3-5A0A140T8M6 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Igkv3-5A0A140T8M6 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Igkv3-5A0A140T8M6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Igkv3-5A0A140T8M6 Dapk1-207ENSMUST00000226059 5009 ntBASIC13.53□□□□□ -0.24
Igkv3-5A0A140T8M6 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Igkv3-5A0A140T8M6 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Igkv3-5A0A140T8M6 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Igkv3-5A0A140T8M6 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Igkv3-5A0A140T8M6 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Igkv3-5A0A140T8M6 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Igkv3-5A0A140T8M6 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Igkv3-5A0A140T8M6 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Igkv3-5A0A140T8M6 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Igkv3-5A0A140T8M6 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
Igkv3-5A0A140T8M6 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Igkv3-5A0A140T8M6 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Igkv3-5A0A140T8M6 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Igkv3-5A0A140T8M6 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Igkv3-5A0A140T8M6 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Igkv3-5A0A140T8M6 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Igkv3-5A0A140T8M6 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Igkv3-5A0A140T8M6 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Igkv3-5A0A140T8M6 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC13.51□□□□□ -0.25
Igkv3-5A0A140T8M6 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Igkv3-5A0A140T8M6 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC13.51□□□□□ -0.25
Igkv3-5A0A140T8M6 AC122317.2-201ENSMUST00000218708 1248 ntBASIC13.51□□□□□ -0.25
Igkv3-5A0A140T8M6 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Igkv3-5A0A140T8M6 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Igkv3-5A0A140T8M6 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Igkv3-5A0A140T8M6 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC13.5□□□□□ -0.25
Igkv3-5A0A140T8M6 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Igkv3-5A0A140T8M6 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Igkv3-5A0A140T8M6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Igkv3-5A0A140T8M6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Igkv3-5A0A140T8M6 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Igkv3-5A0A140T8M6 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Igkv3-5A0A140T8M6 Gm9812-201ENSMUST00000061934 968 ntBASIC13.5□□□□□ -0.25
Igkv3-5A0A140T8M6 Terc-201ENSMUST00000082862 423 ntBASIC13.5□□□□□ -0.25
Igkv3-5A0A140T8M6 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Igkv3-5A0A140T8M6 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Igkv3-5A0A140T8M6 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms