Protein–RNA interactions for Protein: A0A0N4SVP8

Gm5580, Predicted pseudogene 5580, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5580A0A0N4SVP8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC23.52■■□□□ 1.36
Gm5580A0A0N4SVP8 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
Gm5580A0A0N4SVP8 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Gm5580A0A0N4SVP8 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC23.52■■□□□ 1.36
Gm5580A0A0N4SVP8 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC23.52■■□□□ 1.36
Gm5580A0A0N4SVP8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Gm5580A0A0N4SVP8 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Gm5580A0A0N4SVP8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Gm5580A0A0N4SVP8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Gm5580A0A0N4SVP8 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Gm5580A0A0N4SVP8 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Gm5580A0A0N4SVP8 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
Gm5580A0A0N4SVP8 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Gm5580A0A0N4SVP8 Gm37415-201ENSMUST00000192265 2054 ntBASIC23.5■■□□□ 1.35
Gm5580A0A0N4SVP8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Gm5580A0A0N4SVP8 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Gm5580A0A0N4SVP8 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Gm5580A0A0N4SVP8 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Gm5580A0A0N4SVP8 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Gm5580A0A0N4SVP8 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC23.49■■□□□ 1.35
Gm5580A0A0N4SVP8 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Gm5580A0A0N4SVP8 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Gm5580A0A0N4SVP8 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Gm5580A0A0N4SVP8 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
Gm5580A0A0N4SVP8 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Gm5580A0A0N4SVP8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
Gm5580A0A0N4SVP8 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.48■■□□□ 1.35
Gm5580A0A0N4SVP8 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Gm5580A0A0N4SVP8 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Gm5580A0A0N4SVP8 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Gm5580A0A0N4SVP8 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
Gm5580A0A0N4SVP8 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC23.47■■□□□ 1.35
Gm5580A0A0N4SVP8 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC23.47■■□□□ 1.35
Gm5580A0A0N4SVP8 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Gm5580A0A0N4SVP8 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.47■■□□□ 1.35
Gm5580A0A0N4SVP8 Gm44428-201ENSMUST00000204474 874 ntBASIC23.47■■□□□ 1.35
Gm5580A0A0N4SVP8 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Gm5580A0A0N4SVP8 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Gm5580A0A0N4SVP8 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Gm5580A0A0N4SVP8 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Gm5580A0A0N4SVP8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Gm5580A0A0N4SVP8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.46■■□□□ 1.35
Gm5580A0A0N4SVP8 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC23.46■■□□□ 1.35
Gm5580A0A0N4SVP8 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.46■■□□□ 1.35
Gm5580A0A0N4SVP8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Gm5580A0A0N4SVP8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Gm5580A0A0N4SVP8 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Gm5580A0A0N4SVP8 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Gm5580A0A0N4SVP8 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Gm5580A0A0N4SVP8 Gm6311-201ENSMUST00000073790 878 ntBASIC23.45■■□□□ 1.34
Gm5580A0A0N4SVP8 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
Gm5580A0A0N4SVP8 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Gm5580A0A0N4SVP8 Gm12504-201ENSMUST00000120860 2231 ntBASIC23.44■■□□□ 1.34
Gm5580A0A0N4SVP8 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Gm5580A0A0N4SVP8 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Gm5580A0A0N4SVP8 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
Gm5580A0A0N4SVP8 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
Gm5580A0A0N4SVP8 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
Gm5580A0A0N4SVP8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Gm5580A0A0N4SVP8 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
Gm5580A0A0N4SVP8 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
Gm5580A0A0N4SVP8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.42■■□□□ 1.34
Gm5580A0A0N4SVP8 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Gm5580A0A0N4SVP8 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Gm5580A0A0N4SVP8 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Gm5580A0A0N4SVP8 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
Gm5580A0A0N4SVP8 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
Gm5580A0A0N4SVP8 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
Gm5580A0A0N4SVP8 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
Gm5580A0A0N4SVP8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC23.41■■□□□ 1.34
Gm5580A0A0N4SVP8 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC23.41■■□□□ 1.34
Gm5580A0A0N4SVP8 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Gm5580A0A0N4SVP8 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Gm5580A0A0N4SVP8 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Gm5580A0A0N4SVP8 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Gm5580A0A0N4SVP8 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC23.4■■□□□ 1.34
Gm5580A0A0N4SVP8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Gm5580A0A0N4SVP8 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Gm5580A0A0N4SVP8 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC23.4■■□□□ 1.34
Gm5580A0A0N4SVP8 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC23.39■■□□□ 1.34
Gm5580A0A0N4SVP8 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Gm5580A0A0N4SVP8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.39■■□□□ 1.33
Gm5580A0A0N4SVP8 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC23.39■■□□□ 1.33
Gm5580A0A0N4SVP8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Gm5580A0A0N4SVP8 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Gm5580A0A0N4SVP8 Gm42418-201ENSMUST00000182010 1831 ntBASIC23.38■■□□□ 1.33
Gm5580A0A0N4SVP8 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
Gm5580A0A0N4SVP8 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Gm5580A0A0N4SVP8 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
Gm5580A0A0N4SVP8 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
Gm5580A0A0N4SVP8 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Gm5580A0A0N4SVP8 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Gm5580A0A0N4SVP8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Gm5580A0A0N4SVP8 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.37■■□□□ 1.33
Gm5580A0A0N4SVP8 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Gm5580A0A0N4SVP8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Gm5580A0A0N4SVP8 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
Gm5580A0A0N4SVP8 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Gm5580A0A0N4SVP8 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.36■■□□□ 1.33
Gm5580A0A0N4SVP8 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 108.9 ms