Protein–RNA interactions for Protein: A0A0G2JGB9

Trdv2-1, T cell receptor delta variable 2-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-1A0A0G2JGB9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trdv2-1A0A0G2JGB9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trdv2-1A0A0G2JGB9 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trdv2-1A0A0G2JGB9 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trdv2-1A0A0G2JGB9 Zfp131-205ENSMUST00000223812 663 ntBASIC15.81■□□□□ 0.12
Trdv2-1A0A0G2JGB9 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trdv2-1A0A0G2JGB9 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trdv2-1A0A0G2JGB9 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trdv2-1A0A0G2JGB9 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trdv2-1A0A0G2JGB9 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trdv2-1A0A0G2JGB9 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trdv2-1A0A0G2JGB9 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trdv2-1A0A0G2JGB9 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC15.8■□□□□ 0.12
Trdv2-1A0A0G2JGB9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Trdv2-1A0A0G2JGB9 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Trdv2-1A0A0G2JGB9 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trdv2-1A0A0G2JGB9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Trdv2-1A0A0G2JGB9 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Trdv2-1A0A0G2JGB9 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trdv2-1A0A0G2JGB9 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trdv2-1A0A0G2JGB9 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trdv2-1A0A0G2JGB9 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trdv2-1A0A0G2JGB9 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trdv2-1A0A0G2JGB9 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC15.79■□□□□ 0.12
Trdv2-1A0A0G2JGB9 Gm30023-201ENSMUST00000197970 889 ntBASIC15.79■□□□□ 0.12
Trdv2-1A0A0G2JGB9 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trdv2-1A0A0G2JGB9 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trdv2-1A0A0G2JGB9 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trdv2-1A0A0G2JGB9 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC15.78■□□□□ 0.12
Trdv2-1A0A0G2JGB9 Gm24970-201ENSMUST00000175582 82 ntBASIC15.78■□□□□ 0.12
Trdv2-1A0A0G2JGB9 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC15.78■□□□□ 0.12
Trdv2-1A0A0G2JGB9 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Trdv2-1A0A0G2JGB9 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trdv2-1A0A0G2JGB9 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trdv2-1A0A0G2JGB9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trdv2-1A0A0G2JGB9 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trdv2-1A0A0G2JGB9 Gm4430-201ENSMUST00000192413 1943 ntBASIC15.78■□□□□ 0.12
Trdv2-1A0A0G2JGB9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trdv2-1A0A0G2JGB9 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.12
Trdv2-1A0A0G2JGB9 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trdv2-1A0A0G2JGB9 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trdv2-1A0A0G2JGB9 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trdv2-1A0A0G2JGB9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trdv2-1A0A0G2JGB9 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trdv2-1A0A0G2JGB9 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC15.72■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Gm9910-201ENSMUST00000195385 1550 ntBASIC15.71■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trdv2-1A0A0G2JGB9 Gm9397-201ENSMUST00000200125 605 ntBASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms