Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trav13n-1A0A0G2JEU8 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC15.53■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC15.53■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Trav13n-1A0A0G2JEU8 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC15.52■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC15.52■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Nsd1-203ENSMUST00000224156 1149 ntBASIC15.52■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav13n-1A0A0G2JEU8 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC15.51■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC15.51■□□□□ 0.07
Trav13n-1A0A0G2JEU8 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC15.51■□□□□ 0.07
Trav13n-1A0A0G2JEU8 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC15.5■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Gm5812-201ENSMUST00000061073 957 ntBASIC15.5■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC15.49■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trav13n-1A0A0G2JEU8 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trav13n-1A0A0G2JEU8 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav13n-1A0A0G2JEU8 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC15.46■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Gm45444-201ENSMUST00000211394 898 ntBASIC15.46■□□□□ 0.07
Trav13n-1A0A0G2JEU8 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav13n-1A0A0G2JEU8 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Gm15546-201ENSMUST00000122095 826 ntBASIC15.45■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13n-1A0A0G2JEU8 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms