Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav19A0A0B4J1K4 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav19A0A0B4J1K4 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav19A0A0B4J1K4 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav19A0A0B4J1K4 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav19A0A0B4J1K4 AC122317.2-201ENSMUST00000218708 1248 ntBASIC16.11■□□□□ 0.17
Trav19A0A0B4J1K4 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trav19A0A0B4J1K4 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav19A0A0B4J1K4 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav19A0A0B4J1K4 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav19A0A0B4J1K4 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav19A0A0B4J1K4 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav19A0A0B4J1K4 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
Trav19A0A0B4J1K4 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav19A0A0B4J1K4 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC16.1■□□□□ 0.17
Trav19A0A0B4J1K4 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav19A0A0B4J1K4 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav19A0A0B4J1K4 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav19A0A0B4J1K4 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Trav19A0A0B4J1K4 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav19A0A0B4J1K4 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Trav19A0A0B4J1K4 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.09■□□□□ 0.17
Trav19A0A0B4J1K4 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav19A0A0B4J1K4 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav19A0A0B4J1K4 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav19A0A0B4J1K4 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav19A0A0B4J1K4 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav19A0A0B4J1K4 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC16.09■□□□□ 0.17
Trav19A0A0B4J1K4 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav19A0A0B4J1K4 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.09■□□□□ 0.17
Trav19A0A0B4J1K4 AC115037.1-201ENSMUST00000223391 2173 ntBASIC16.09■□□□□ 0.17
Trav19A0A0B4J1K4 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Trav19A0A0B4J1K4 AC153524.1-201ENSMUST00000220436 1935 ntBASIC16.08■□□□□ 0.16
Trav19A0A0B4J1K4 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav19A0A0B4J1K4 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
Trav19A0A0B4J1K4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav19A0A0B4J1K4 Mir3960-201ENSMUST00000198213 73 ntBASIC16.08■□□□□ 0.16
Trav19A0A0B4J1K4 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Trav19A0A0B4J1K4 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav19A0A0B4J1K4 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Trav19A0A0B4J1K4 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav19A0A0B4J1K4 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
Trav19A0A0B4J1K4 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trav19A0A0B4J1K4 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav19A0A0B4J1K4 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav19A0A0B4J1K4 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav19A0A0B4J1K4 Terc-201ENSMUST00000082862 423 ntBASIC16.07■□□□□ 0.16
Trav19A0A0B4J1K4 Gm12818-201ENSMUST00000117562 1349 ntBASIC16.07■□□□□ 0.16
Trav19A0A0B4J1K4 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC16.07■□□□□ 0.16
Trav19A0A0B4J1K4 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav19A0A0B4J1K4 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav19A0A0B4J1K4 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC16.07■□□□□ 0.16
Trav19A0A0B4J1K4 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trav19A0A0B4J1K4 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trav19A0A0B4J1K4 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav19A0A0B4J1K4 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC16.06■□□□□ 0.16
Trav19A0A0B4J1K4 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC16.06■□□□□ 0.16
Trav19A0A0B4J1K4 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav19A0A0B4J1K4 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav19A0A0B4J1K4 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav19A0A0B4J1K4 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav19A0A0B4J1K4 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav19A0A0B4J1K4 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav19A0A0B4J1K4 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC16.05■□□□□ 0.16
Trav19A0A0B4J1K4 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC16.05■□□□□ 0.16
Trav19A0A0B4J1K4 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav19A0A0B4J1K4 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC16.05■□□□□ 0.16
Trav19A0A0B4J1K4 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav19A0A0B4J1K4 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav19A0A0B4J1K4 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav19A0A0B4J1K4 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav19A0A0B4J1K4 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav19A0A0B4J1K4 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav19A0A0B4J1K4 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav19A0A0B4J1K4 AC154454.1-201ENSMUST00000225253 216 ntBASIC16.04■□□□□ 0.16
Trav19A0A0B4J1K4 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav19A0A0B4J1K4 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Trav19A0A0B4J1K4 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav19A0A0B4J1K4 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.03■□□□□ 0.16
Trav19A0A0B4J1K4 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Trav19A0A0B4J1K4 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Trav19A0A0B4J1K4 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav19A0A0B4J1K4 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.02■□□□□ 0.16
Trav19A0A0B4J1K4 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trav19A0A0B4J1K4 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trav19A0A0B4J1K4 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trav19A0A0B4J1K4 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav19A0A0B4J1K4 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav19A0A0B4J1K4 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC16.02■□□□□ 0.15
Trav19A0A0B4J1K4 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav19A0A0B4J1K4 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav19A0A0B4J1K4 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav19A0A0B4J1K4 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav19A0A0B4J1K4 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav19A0A0B4J1K4 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav19A0A0B4J1K4 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav19A0A0B4J1K4 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav19A0A0B4J1K4 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav19A0A0B4J1K4 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Trav19A0A0B4J1K4 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms