Protein–RNA interactions for Protein: A0A0A6YXF1

Ighv3-4, Immunoglobulin heavy variable V3-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-4A0A0A6YXF1 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ighv3-4A0A0A6YXF1 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ighv3-4A0A0A6YXF1 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ighv3-4A0A0A6YXF1 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ighv3-4A0A0A6YXF1 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.07■□□□□ 0.48
Ighv3-4A0A0A6YXF1 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv3-4A0A0A6YXF1 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv3-4A0A0A6YXF1 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Ighv3-4A0A0A6YXF1 Gm10399-202ENSMUST00000202768 748 ntBASIC18.07■□□□□ 0.48
Ighv3-4A0A0A6YXF1 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv3-4A0A0A6YXF1 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.06■□□□□ 0.48
Ighv3-4A0A0A6YXF1 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.06■□□□□ 0.48
Ighv3-4A0A0A6YXF1 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ighv3-4A0A0A6YXF1 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ighv3-4A0A0A6YXF1 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ighv3-4A0A0A6YXF1 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ighv3-4A0A0A6YXF1 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ighv3-4A0A0A6YXF1 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.05■□□□□ 0.48
Ighv3-4A0A0A6YXF1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv3-4A0A0A6YXF1 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv3-4A0A0A6YXF1 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Ighv3-4A0A0A6YXF1 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.05■□□□□ 0.48
Ighv3-4A0A0A6YXF1 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Ighv3-4A0A0A6YXF1 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv3-4A0A0A6YXF1 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv3-4A0A0A6YXF1 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Ighv3-4A0A0A6YXF1 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv3-4A0A0A6YXF1 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.04■□□□□ 0.48
Ighv3-4A0A0A6YXF1 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv3-4A0A0A6YXF1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.04■□□□□ 0.48
Ighv3-4A0A0A6YXF1 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv3-4A0A0A6YXF1 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv3-4A0A0A6YXF1 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Ighv3-4A0A0A6YXF1 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv3-4A0A0A6YXF1 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv3-4A0A0A6YXF1 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.03■□□□□ 0.48
Ighv3-4A0A0A6YXF1 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv3-4A0A0A6YXF1 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv3-4A0A0A6YXF1 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ighv3-4A0A0A6YXF1 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ighv3-4A0A0A6YXF1 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Ighv3-4A0A0A6YXF1 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ighv3-4A0A0A6YXF1 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ighv3-4A0A0A6YXF1 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Gm21956-201ENSMUST00000179946 522 ntBASIC18.01■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.01■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ighv3-4A0A0A6YXF1 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Gm12922-201ENSMUST00000120626 809 ntBASIC17.99■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.99■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.99■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.98■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.98■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.96■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.96■□□□□ 0.47
Ighv3-4A0A0A6YXF1 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.96■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ighv3-4A0A0A6YXF1 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.95■□□□□ 0.46
Ighv3-4A0A0A6YXF1 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Ighv3-4A0A0A6YXF1 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv3-4A0A0A6YXF1 AC153890.1-201ENSMUST00000220021 2469 ntBASIC17.95■□□□□ 0.46
Ighv3-4A0A0A6YXF1 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv3-4A0A0A6YXF1 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv3-4A0A0A6YXF1 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms