Protein–RNA interactions for Protein: A0A087WSK7

Gm28778, Predicted gene 28778 (Fragment), mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28778A0A087WSK7 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm28778A0A087WSK7 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm28778A0A087WSK7 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Gm28778A0A087WSK7 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm28778A0A087WSK7 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Gm28778A0A087WSK7 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm28778A0A087WSK7 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm28778A0A087WSK7 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm28778A0A087WSK7 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm28778A0A087WSK7 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm28778A0A087WSK7 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm28778A0A087WSK7 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm28778A0A087WSK7 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gm28778A0A087WSK7 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm28778A0A087WSK7 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm28778A0A087WSK7 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm28778A0A087WSK7 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.57■□□□□ 0.4
Gm28778A0A087WSK7 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.57■□□□□ 0.4
Gm28778A0A087WSK7 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm28778A0A087WSK7 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm28778A0A087WSK7 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm28778A0A087WSK7 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm28778A0A087WSK7 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm28778A0A087WSK7 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Gm28778A0A087WSK7 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gm28778A0A087WSK7 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm28778A0A087WSK7 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm28778A0A087WSK7 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm28778A0A087WSK7 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.56■□□□□ 0.4
Gm28778A0A087WSK7 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Gm28778A0A087WSK7 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.56■□□□□ 0.4
Gm28778A0A087WSK7 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm28778A0A087WSK7 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm28778A0A087WSK7 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm28778A0A087WSK7 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm28778A0A087WSK7 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gm28778A0A087WSK7 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm28778A0A087WSK7 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gm28778A0A087WSK7 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm28778A0A087WSK7 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm28778A0A087WSK7 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.55■□□□□ 0.4
Gm28778A0A087WSK7 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm28778A0A087WSK7 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm28778A0A087WSK7 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm28778A0A087WSK7 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm28778A0A087WSK7 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.54■□□□□ 0.4
Gm28778A0A087WSK7 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gm28778A0A087WSK7 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Gm28778A0A087WSK7 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Gm28778A0A087WSK7 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm28778A0A087WSK7 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Gm28778A0A087WSK7 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm28778A0A087WSK7 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm28778A0A087WSK7 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.53■□□□□ 0.4
Gm28778A0A087WSK7 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm28778A0A087WSK7 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm28778A0A087WSK7 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Gm28778A0A087WSK7 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm28778A0A087WSK7 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
Gm28778A0A087WSK7 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Gm28778A0A087WSK7 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Gm28778A0A087WSK7 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Gm28778A0A087WSK7 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.52■□□□□ 0.4
Gm28778A0A087WSK7 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm28778A0A087WSK7 Gm5921-201ENSMUST00000075898 882 ntBASIC17.52■□□□□ 0.4
Gm28778A0A087WSK7 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm28778A0A087WSK7 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Gm28778A0A087WSK7 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Gm28778A0A087WSK7 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Gm28778A0A087WSK7 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm28778A0A087WSK7 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm28778A0A087WSK7 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Gm28778A0A087WSK7 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.51■□□□□ 0.39
Gm28778A0A087WSK7 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.51■□□□□ 0.39
Gm28778A0A087WSK7 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.51■□□□□ 0.39
Gm28778A0A087WSK7 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm28778A0A087WSK7 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm28778A0A087WSK7 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Gm28778A0A087WSK7 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.5■□□□□ 0.39
Gm28778A0A087WSK7 Gm45444-201ENSMUST00000211394 898 ntBASIC17.5■□□□□ 0.39
Gm28778A0A087WSK7 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.5■□□□□ 0.39
Gm28778A0A087WSK7 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm28778A0A087WSK7 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm28778A0A087WSK7 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Gm28778A0A087WSK7 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.5■□□□□ 0.39
Gm28778A0A087WSK7 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm28778A0A087WSK7 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm28778A0A087WSK7 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm28778A0A087WSK7 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Gm28778A0A087WSK7 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Gm28778A0A087WSK7 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Gm28778A0A087WSK7 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm28778A0A087WSK7 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm28778A0A087WSK7 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm28778A0A087WSK7 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.48■□□□□ 0.39
Gm28778A0A087WSK7 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Gm28778A0A087WSK7 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm28778A0A087WSK7 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm28778A0A087WSK7 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Gm28778A0A087WSK7 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms