Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Gm14121-201ENSMUST00000121441 1380 ntBASIC15.96■□□□□ 0.15
Trav6n-6A0A075B6B2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC15.96■□□□□ 0.15
Trav6n-6A0A075B6B2 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6n-6A0A075B6B2 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6n-6A0A075B6B2 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6n-6A0A075B6B2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6n-6A0A075B6B2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6n-6A0A075B6B2 Gm12504-201ENSMUST00000120860 2231 ntBASIC15.95■□□□□ 0.14
Trav6n-6A0A075B6B2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6n-6A0A075B6B2 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6n-6A0A075B6B2 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6n-6A0A075B6B2 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6n-6A0A075B6B2 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Trav6n-6A0A075B6B2 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6n-6A0A075B6B2 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6n-6A0A075B6B2 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Trav6n-6A0A075B6B2 Gm13889-201ENSMUST00000099689 1386 ntBASIC15.95■□□□□ 0.14
Trav6n-6A0A075B6B2 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6n-6A0A075B6B2 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6n-6A0A075B6B2 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6n-6A0A075B6B2 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6n-6A0A075B6B2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6n-6A0A075B6B2 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6n-6A0A075B6B2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6n-6A0A075B6B2 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC15.94■□□□□ 0.14
Trav6n-6A0A075B6B2 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
Trav6n-6A0A075B6B2 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6n-6A0A075B6B2 Mir3960-201ENSMUST00000198213 73 ntBASIC15.94■□□□□ 0.14
Trav6n-6A0A075B6B2 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC15.94■□□□□ 0.14
Trav6n-6A0A075B6B2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6n-6A0A075B6B2 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6n-6A0A075B6B2 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trav6n-6A0A075B6B2 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6n-6A0A075B6B2 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
Trav6n-6A0A075B6B2 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6n-6A0A075B6B2 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6n-6A0A075B6B2 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6n-6A0A075B6B2 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6n-6A0A075B6B2 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6n-6A0A075B6B2 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6n-6A0A075B6B2 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6n-6A0A075B6B2 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6n-6A0A075B6B2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Trav6n-6A0A075B6B2 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6n-6A0A075B6B2 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trav6n-6A0A075B6B2 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6n-6A0A075B6B2 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6n-6A0A075B6B2 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6n-6A0A075B6B2 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6n-6A0A075B6B2 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6n-6A0A075B6B2 Gm6311-201ENSMUST00000073790 878 ntBASIC15.92■□□□□ 0.14
Trav6n-6A0A075B6B2 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6n-6A0A075B6B2 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC15.92■□□□□ 0.14
Trav6n-6A0A075B6B2 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6n-6A0A075B6B2 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6n-6A0A075B6B2 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6n-6A0A075B6B2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6n-6A0A075B6B2 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trav6n-6A0A075B6B2 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trav6n-6A0A075B6B2 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trav6n-6A0A075B6B2 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6n-6A0A075B6B2 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC15.9■□□□□ 0.14
Trav6n-6A0A075B6B2 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6n-6A0A075B6B2 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6n-6A0A075B6B2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6n-6A0A075B6B2 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Trav6n-6A0A075B6B2 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6n-6A0A075B6B2 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6n-6A0A075B6B2 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6n-6A0A075B6B2 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6n-6A0A075B6B2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6n-6A0A075B6B2 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6n-6A0A075B6B2 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6n-6A0A075B6B2 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6n-6A0A075B6B2 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC15.89■□□□□ 0.13
Trav6n-6A0A075B6B2 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6n-6A0A075B6B2 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6n-6A0A075B6B2 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6n-6A0A075B6B2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6n-6A0A075B6B2 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trav6n-6A0A075B6B2 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6n-6A0A075B6B2 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6n-6A0A075B6B2 Gm4430-201ENSMUST00000192413 1943 ntBASIC15.88■□□□□ 0.13
Trav6n-6A0A075B6B2 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trav6n-6A0A075B6B2 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6n-6A0A075B6B2 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.88■□□□□ 0.13
Trav6n-6A0A075B6B2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trav6n-6A0A075B6B2 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6n-6A0A075B6B2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6n-6A0A075B6B2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6n-6A0A075B6B2 Gm4419-202ENSMUST00000226239 1431 ntBASIC15.87■□□□□ 0.13
Trav6n-6A0A075B6B2 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6n-6A0A075B6B2 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Trav6n-6A0A075B6B2 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6n-6A0A075B6B2 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
Trav6n-6A0A075B6B2 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6n-6A0A075B6B2 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6n-6A0A075B6B2 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trav6n-6A0A075B6B2 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC15.86■□□□□ 0.13
Trav6n-6A0A075B6B2 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms