Protein–RNA interactions for Protein: A0A075B695

Trav9d-3, T cell receptor alpha variable 9D-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3A0A075B695 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9d-3A0A075B695 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9d-3A0A075B695 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9d-3A0A075B695 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav9d-3A0A075B695 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav9d-3A0A075B695 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav9d-3A0A075B695 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav9d-3A0A075B695 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav9d-3A0A075B695 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav9d-3A0A075B695 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav9d-3A0A075B695 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav9d-3A0A075B695 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav9d-3A0A075B695 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trav9d-3A0A075B695 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav9d-3A0A075B695 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav9d-3A0A075B695 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav9d-3A0A075B695 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav9d-3A0A075B695 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav9d-3A0A075B695 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav9d-3A0A075B695 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav9d-3A0A075B695 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav9d-3A0A075B695 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9d-3A0A075B695 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Trav9d-3A0A075B695 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav9d-3A0A075B695 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC15.31■□□□□ 0.04
Trav9d-3A0A075B695 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trav9d-3A0A075B695 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9d-3A0A075B695 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC15.31■□□□□ 0.04
Trav9d-3A0A075B695 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Trav9d-3A0A075B695 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9d-3A0A075B695 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9d-3A0A075B695 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9d-3A0A075B695 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trav9d-3A0A075B695 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trav9d-3A0A075B695 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trav9d-3A0A075B695 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav9d-3A0A075B695 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav9d-3A0A075B695 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav9d-3A0A075B695 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav9d-3A0A075B695 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav9d-3A0A075B695 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9d-3A0A075B695 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9d-3A0A075B695 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9d-3A0A075B695 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9d-3A0A075B695 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9d-3A0A075B695 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9d-3A0A075B695 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9d-3A0A075B695 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9d-3A0A075B695 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9d-3A0A075B695 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9d-3A0A075B695 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9d-3A0A075B695 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9d-3A0A075B695 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9d-3A0A075B695 Gm11175-201ENSMUST00000116172 543 ntBASIC15.29■□□□□ 0.04
Trav9d-3A0A075B695 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9d-3A0A075B695 AC151971.4-201ENSMUST00000214717 704 ntBASIC15.29■□□□□ 0.04
Trav9d-3A0A075B695 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9d-3A0A075B695 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9d-3A0A075B695 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav9d-3A0A075B695 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav9d-3A0A075B695 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav9d-3A0A075B695 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trav9d-3A0A075B695 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trav9d-3A0A075B695 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC15.27■□□□□ 0.04
Trav9d-3A0A075B695 Gm27502-201ENSMUST00000183495 199 ntBASIC15.27■□□□□ 0.04
Trav9d-3A0A075B695 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Trav9d-3A0A075B695 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav9d-3A0A075B695 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9d-3A0A075B695 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9d-3A0A075B695 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9d-3A0A075B695 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9d-3A0A075B695 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9d-3A0A075B695 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9d-3A0A075B695 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav9d-3A0A075B695 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav9d-3A0A075B695 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav9d-3A0A075B695 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav9d-3A0A075B695 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav9d-3A0A075B695 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trav9d-3A0A075B695 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav9d-3A0A075B695 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav9d-3A0A075B695 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav9d-3A0A075B695 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav9d-3A0A075B695 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav9d-3A0A075B695 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trav9d-3A0A075B695 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC15.24■□□□□ 0.03
Trav9d-3A0A075B695 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav9d-3A0A075B695 Gm22567-201ENSMUST00000175542 342 ntBASIC15.24■□□□□ 0.03
Trav9d-3A0A075B695 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav9d-3A0A075B695 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC15.24■□□□□ 0.03
Trav9d-3A0A075B695 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav9d-3A0A075B695 AC117245.4-201ENSMUST00000217388 1646 ntBASIC15.24■□□□□ 0.03
Trav9d-3A0A075B695 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav9d-3A0A075B695 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav9d-3A0A075B695 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC15.24■□□□□ 0.03
Trav9d-3A0A075B695 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Trav9d-3A0A075B695 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trav9d-3A0A075B695 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav9d-3A0A075B695 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9d-3A0A075B695 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms