Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.67■□□□□ 0.42
Trav18A0A075B656 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav18A0A075B656 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav18A0A075B656 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav18A0A075B656 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav18A0A075B656 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trav18A0A075B656 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav18A0A075B656 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trav18A0A075B656 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav18A0A075B656 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav18A0A075B656 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav18A0A075B656 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav18A0A075B656 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav18A0A075B656 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav18A0A075B656 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav18A0A075B656 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.65■□□□□ 0.42
Trav18A0A075B656 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav18A0A075B656 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav18A0A075B656 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Trav18A0A075B656 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav18A0A075B656 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.64■□□□□ 0.41
Trav18A0A075B656 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.64■□□□□ 0.41
Trav18A0A075B656 Gm44428-201ENSMUST00000204474 874 ntBASIC17.64■□□□□ 0.41
Trav18A0A075B656 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav18A0A075B656 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.64■□□□□ 0.41
Trav18A0A075B656 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav18A0A075B656 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trav18A0A075B656 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
Trav18A0A075B656 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav18A0A075B656 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trav18A0A075B656 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav18A0A075B656 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC17.63■□□□□ 0.41
Trav18A0A075B656 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.63■□□□□ 0.41
Trav18A0A075B656 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav18A0A075B656 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav18A0A075B656 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav18A0A075B656 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav18A0A075B656 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Trav18A0A075B656 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav18A0A075B656 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Trav18A0A075B656 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav18A0A075B656 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC17.61■□□□□ 0.41
Trav18A0A075B656 Scarna2-201ENSMUST00000157560 414 ntBASIC17.61■□□□□ 0.41
Trav18A0A075B656 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav18A0A075B656 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav18A0A075B656 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.61■□□□□ 0.41
Trav18A0A075B656 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav18A0A075B656 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav18A0A075B656 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav18A0A075B656 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav18A0A075B656 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav18A0A075B656 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav18A0A075B656 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav18A0A075B656 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav18A0A075B656 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Trav18A0A075B656 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.59■□□□□ 0.41
Trav18A0A075B656 Gm9806-201ENSMUST00000051080 552 ntBASIC17.59■□□□□ 0.41
Trav18A0A075B656 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav18A0A075B656 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Trav18A0A075B656 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav18A0A075B656 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC17.58■□□□□ 0.4
Trav18A0A075B656 Gm16437-201ENSMUST00000025669 507 ntBASIC17.58■□□□□ 0.4
Trav18A0A075B656 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav18A0A075B656 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Trav18A0A075B656 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav18A0A075B656 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.58■□□□□ 0.4
Trav18A0A075B656 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav18A0A075B656 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav18A0A075B656 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.57■□□□□ 0.4
Trav18A0A075B656 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav18A0A075B656 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav18A0A075B656 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav18A0A075B656 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav18A0A075B656 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trav18A0A075B656 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav18A0A075B656 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav18A0A075B656 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav18A0A075B656 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav18A0A075B656 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trav18A0A075B656 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav18A0A075B656 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Trav18A0A075B656 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav18A0A075B656 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav18A0A075B656 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav18A0A075B656 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trav18A0A075B656 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Trav18A0A075B656 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.55■□□□□ 0.4
Trav18A0A075B656 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.55■□□□□ 0.4
Trav18A0A075B656 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav18A0A075B656 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trav18A0A075B656 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav18A0A075B656 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav18A0A075B656 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav18A0A075B656 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav18A0A075B656 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Trav18A0A075B656 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav18A0A075B656 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav18A0A075B656 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav18A0A075B656 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav18A0A075B656 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms