Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav4-4-dv10A0A075B651 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav4-4-dv10A0A075B651 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC16.86■□□□□ 0.29
Trav4-4-dv10A0A075B651 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav4-4-dv10A0A075B651 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Trav4-4-dv10A0A075B651 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav4-4-dv10A0A075B651 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trav4-4-dv10A0A075B651 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav4-4-dv10A0A075B651 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav4-4-dv10A0A075B651 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav4-4-dv10A0A075B651 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav4-4-dv10A0A075B651 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.85■□□□□ 0.29
Trav4-4-dv10A0A075B651 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav4-4-dv10A0A075B651 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC16.85■□□□□ 0.29
Trav4-4-dv10A0A075B651 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Trav4-4-dv10A0A075B651 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav4-4-dv10A0A075B651 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav4-4-dv10A0A075B651 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav4-4-dv10A0A075B651 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav4-4-dv10A0A075B651 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Trav4-4-dv10A0A075B651 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav4-4-dv10A0A075B651 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav4-4-dv10A0A075B651 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav4-4-dv10A0A075B651 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Trav4-4-dv10A0A075B651 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Trav4-4-dv10A0A075B651 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trav4-4-dv10A0A075B651 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav4-4-dv10A0A075B651 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Trav4-4-dv10A0A075B651 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC16.83■□□□□ 0.28
Trav4-4-dv10A0A075B651 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav4-4-dv10A0A075B651 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav4-4-dv10A0A075B651 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav4-4-dv10A0A075B651 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav4-4-dv10A0A075B651 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav4-4-dv10A0A075B651 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav4-4-dv10A0A075B651 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav4-4-dv10A0A075B651 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Trav4-4-dv10A0A075B651 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trav4-4-dv10A0A075B651 AC117245.4-201ENSMUST00000217388 1646 ntBASIC16.82■□□□□ 0.28
Trav4-4-dv10A0A075B651 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC16.82■□□□□ 0.28
Trav4-4-dv10A0A075B651 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav4-4-dv10A0A075B651 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav4-4-dv10A0A075B651 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav4-4-dv10A0A075B651 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC16.82■□□□□ 0.28
Trav4-4-dv10A0A075B651 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav4-4-dv10A0A075B651 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav4-4-dv10A0A075B651 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.82■□□□□ 0.28
Trav4-4-dv10A0A075B651 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trav4-4-dv10A0A075B651 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav4-4-dv10A0A075B651 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav4-4-dv10A0A075B651 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav4-4-dv10A0A075B651 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav4-4-dv10A0A075B651 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav4-4-dv10A0A075B651 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC16.81■□□□□ 0.28
Trav4-4-dv10A0A075B651 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav4-4-dv10A0A075B651 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav4-4-dv10A0A075B651 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav4-4-dv10A0A075B651 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Trav4-4-dv10A0A075B651 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Trav4-4-dv10A0A075B651 Gm42418-201ENSMUST00000182010 1831 ntBASIC16.8■□□□□ 0.28
Trav4-4-dv10A0A075B651 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav4-4-dv10A0A075B651 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav4-4-dv10A0A075B651 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC16.79■□□□□ 0.28
Trav4-4-dv10A0A075B651 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav4-4-dv10A0A075B651 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav4-4-dv10A0A075B651 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav4-4-dv10A0A075B651 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Trav4-4-dv10A0A075B651 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Trav4-4-dv10A0A075B651 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav4-4-dv10A0A075B651 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav4-4-dv10A0A075B651 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav4-4-dv10A0A075B651 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Trav4-4-dv10A0A075B651 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav4-4-dv10A0A075B651 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC16.77■□□□□ 0.28
Trav4-4-dv10A0A075B651 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Trav4-4-dv10A0A075B651 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav4-4-dv10A0A075B651 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC16.77■□□□□ 0.28
Trav4-4-dv10A0A075B651 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trav4-4-dv10A0A075B651 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav4-4-dv10A0A075B651 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Trav4-4-dv10A0A075B651 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Trav4-4-dv10A0A075B651 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trav4-4-dv10A0A075B651 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trav4-4-dv10A0A075B651 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.76■□□□□ 0.27
Trav4-4-dv10A0A075B651 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC16.76■□□□□ 0.27
Trav4-4-dv10A0A075B651 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav4-4-dv10A0A075B651 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav4-4-dv10A0A075B651 Gm7432-201ENSMUST00000210343 879 ntBASIC16.75■□□□□ 0.27
Trav4-4-dv10A0A075B651 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Trav4-4-dv10A0A075B651 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav4-4-dv10A0A075B651 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav4-4-dv10A0A075B651 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav4-4-dv10A0A075B651 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trav4-4-dv10A0A075B651 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav4-4-dv10A0A075B651 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav4-4-dv10A0A075B651 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav4-4-dv10A0A075B651 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC16.74■□□□□ 0.27
Trav4-4-dv10A0A075B651 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav4-4-dv10A0A075B651 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav4-4-dv10A0A075B651 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms